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IPR005873

Source: InterPro

Description

IPR005873 is a DENR, eukaryotes.

<p>This entry includes translation machinery-associated protein 22 (Tma22) from yeasts and density-regulated protein (DENR) from animals. DENR may be involved in the translation of target mRNAs by scanning and recognition of the initiation codon [[cite:PUB00090066]]. DENR and MCT-1 form a heterodimer, which binds to the ribosome and is involved in unconventional translation initiation, reinitiation, and recycling [[cite:PUB00092572]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003743
Molecular function Translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
Subterm of

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
Lj6g3v1249640.1
– PREDICTED: translation machinery-associated protein 22-like isoform 1 [Glycine max] gi|356530368|ref|XP_003533754.1|
Domains
10
LotjaGi6g1v0231400.1
– Translation machinery-associated protein 22; TAIR: AT5G11900.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|O42929|DENR_SCHPO Translation machinery-associated protein 22; TrEMBL-Plants: tr|I3SCA3|I3SCA3_LOTJA Translation machinery-associated protein 22; Found in the gene: LotjaGi6g1v0231400
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 50.00