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IPR012463 is a Ethylene-responsive binding factor-associated repression.
<p>The EAR motif is the ethylene-responsive element binding factor-associated amphiphilic repression motif. This motif binds to the Groucho/Tup1-type co-repressor TOPLESS (TPL) and TPL-related proteins. The motif is frequently to be find at the N terminus of NINJA, or Novel INteractor of JAZ, proteins [[cite:PUB00066523]]. The EAR motif, defined by the consensus sequence patterns of either LxLxL or DLN xxP, is the most predominant form of transcriptional repression motif so far identified in plants. It is highly conserved in transcriptional regulators that are known to function as negative regulators in a broad range of developmental and physiological processes across evolutionarily diverse plant species [[cite:PUB00075457]]. This family is closely related to family AUX_IAA ([interpro:IPR003311]) which also has an LxLxL signature.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ninja-family protein AFP2-like [Glycine max] gi|356526505|ref|XP_003531858.1| | 10 | ||
| – | PREDICTED: ninja-family protein AFP1-like [Cicer arietinum] gi|502094378|ref|XP_004490204.1| | 11 | ||
| – | Ninja-family protein; TAIR: AT3G29575.1 ABI five binding protein 3; Swiss-Prot: sp|B6SM63|NNJA5_MAIZE Ninja-family protein 5; TrEMBL-Plants: tr|A0A0S3RRT6|A0A0S3RRT6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0513000 | 11 | ||
| – | Ninja-family protein; TAIR: AT1G69260.1 ABI five binding protein; Swiss-Prot: sp|Q9LQ98|AFP1_ARATH Ninja-family protein AFP1; TrEMBL-Plants: tr|A0A072UEP6|A0A072UEP6_MEDTR Ninja-family protein AFP1; Found in the gene: LotjaGi2g1v0294100 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 25.00 |