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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0294100 |
| Transcript ID | LotjaGi2g1v0294100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ninja-family protein; TAIR: AT1G69260.1 ABI five binding protein; Swiss-Prot: sp|Q9LQ98|AFP1_ARATH Ninja-family protein AFP1; TrEMBL-Plants: tr|A0A072UEP6|A0A072UEP6_MEDTR Ninja-family protein AFP1; Found in the gene: LotjaGi2g1v0294100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76898914..76903786) extracted from Lotus japonicus Gifu genome v1.2.
CGATCTTGTAGTCACATCCCAGGGACATTTTCGTCATCACATAAATATTATTCCCCTATTGTCTTCTTCTTCTCATATCA TATTTTTTCTGTTCCAATTCACTTCTCCCATTTCTTCTTCCATCTTCTATCTTGTGTTTTTTTTTCCTCTGTTCCGGAAA ATCATATCATAATTTGCAACTTTTTATTTATTTATTTATTTATTTACGGTGATAAATAGAATTCATTGCTTCCTGGATTA CCGGAACAAGGATTTTATTTATTTTTCTTTCAAAATTCTATTGGTTTTCAATTCTTTTCCACACAATTTCAATTTCAATG GTGTTGTTTTTCACCAACCTGAACGATTTTGTGATCTGGGTTTTTGCTATTCTGGGTGTTATTGGATGAGAGAGCATGTT TTGTTTCATGGGTTTTGCTGATTTGAATCATCACTATCATCGTCATCATCATTTGTCACCGGTAGCTAGAGCTTGTGATG TTTTGATGGAGAATCAAAGTCGTCGTTATCATTAGATTCTGCGTGTGTGAATGAAGATGGAGAAGTACCCGAGAGATCTG CTTCAGAGATTCCTCGTGTCAAGTGGTGGCAGTGAGAAGATTGATAACAGAACGCAGACACAGACACAGCAACATCATCA GGGTGAAGAAGAAGAGGAGGAAGATGAAGGGATTGAGCTGCACCTGGGACTCTCGTTGGGTGGAAGATTTGGGGTGGACA AGCATGCCAAGAACCAGCACCTTGTGCGCTCTTCCTCCGTTGTGGGGACAATGCCTCTGCTCCGGGAGGATTCCGTGGCG GCGTCGCCGGCGTACTCGACCCTTGTGAGATCTTCATCGCTGCCATCGGAGACTGAGGAGGAGTGGAGGAAGCGGAAGAA GTTGCAGACGCTGCGGAGGATGGAGGCTAAGAGGAGGAGGTCGGAGAAGCAGAGAGGTTCCAAGTCGGAGAGAGATGTCG CCGGCGTGAGTTCCGGTGGTGGTGGTTTGGAGGAAGTGGAGGGTGCAGGTGCAAGTGCAATAACAATGGGGTTGAATAGA CTTAGTTCTTCAACGGCGACGCCACCACCGTTTGGGTTGCCGAGTTGGGGTGTGGCGGGAAAGCAAGTTGTTCTTGGTGA TGTTTTGGGGAAAGGGAAAGTTGGGGTTGGTTTTCAGGGGTTGTTTGCACAACCATCTTCTCAGGGTTCATCAGCGGAAT CCCAAGGGGGAAGCTCCTCATCAGTTTCTGAAATGGACAGCAAGCCTGTTCTAGGTAACTCATTCAATTCTGCTCTTTTT GCTGTCCTCTTACCTTGTAAACTACTCTTTGGATTGTTAATTAGTTTCCTTGCATGTTCTTTTATTTACTACCATAATTA TAAACAGGTTTTCTTTATGGCTTACTGAGTTACTTGTTTCAAAGTGCTTCTGGATTAAGCAAATTGGCTGGTAGCAAGAT TGATGAAGTATAGAGATAATTTTTTTGATTATGTTGCCACTGGTTTCCACACTTTCTTTGTTGAATTTCAAAAACTGCTT AGGTGATTGAAATAGGCTTGTAGTTTAACACTAGTCGAGGGACTAAATATTTAGTGAGATGCTCATTCTGAGCATGTTTG GTTCCACGTTTGCAAGTGTTAGAATTGATTCTCTGTGGAATCAATCTTTGGGTGTTTGAATGTTCATTTTCATAATTGAT TTTGGCTCCAAAATCAAATTCAGGGTTAAATAAAAGTTATTTTACTTGGCACACTATTTGTTTCCTTGTTTTGGTCTCTC TATATCCGAACTCGGAATGAGAATAACTTGGGTCACTTTTCCCATTTGGTTTCTCCTATGTATTAGTATCTCAAACATGG TAGTTAGCATGGTCATCAAAATTTGGGTTTATTGATTCATATTGCGCCGGTGAATCGAATCTGGTATTGAACTGTACACT GAAGCGCAGCCAAATAGGATGAATCGAGATTCAGGAAGCAACTCGTGCAATTATAAGTTTTGCTGGTTGAGCTGACAAAC AAGTCAGGTCACAAACTCAGTTCTTAAAAATGATCCAGAGATTTTTTTTCTTTTGTTCAGTTTTTGTTTAATTAAATGGG AGGGAGAGCGCCGAAATACTTCGCTTCATTGATCCAAGTTAGATTATTGACCCTAGGGTTGGTGCCTACTTGCTTTAACT ATGCCTTATTCTTTTCTGCCTCCAAATTATCATGTTTCCTTTTGTTTGCCTTTATTCTTTAGGATTCAAACCCCCTAAGG TCTCTTTCTTTCTCCCACATGAAGAACCTATTCTACATTTTTCCCTTACATTAGTGTTGTGTTATTTCTTTATTGGGGTT CTTTTTTATGTAATAGGATTTAAGTATAAAATGTAGGAAAGTAGTCTACATTTTATTGATTCTTTCTAGGGATTGAGCAC TTGAACCTTGTATAGCCACTCAGCGTTTTTCTTCTCATTTTGATTTATGATTTGGATCTTGGATTATTTTGAAGTTTATG CATGATATATCAACTTATGTTTCAGTTTATAACTTGGTTTTTTCTGCATCATATATCTTACGATTCATCCAAAGATTGGA TTCACAAGGTTTTCCGATTCACGATTCAAATCTCGATTTGATAACCATGATCTCAAACTATGTGATTCTTAGGTTTTCAT TTTCACCACTCTTATGACAAAGGGGAAAAGAAGATGCTAGGTTTTGCTTATGAGAACTCTTGCATTCTTATTTGATTTGC ATTAACATTGTAGATGAGAATTCAGTGTAAATACATATAGTTTAGTAGGTTGCTTTATAGTTATTCTGTACAGCTTCCTT TGGTAGCGCTGACTTGGGCCAATATCGTTTGTCGCTAAATAGAAATTGATAAGTAATTATATATGGTGTTGAAAGATTTA TGTATGGTAGGTGTGTTGTACCTATCCGATGTTTACTTCTTAGCACGTTTATGTGCTCTCTGATAAACCTAAGTTATATA TGATAGGCTATGTGTTTGATTGTGCCAGATAGTTTGTCTGTGTATACTGACTAATATTGCAAAATCACTATTATTGAATT GCCATTCTTGTTTGCAACATTTTCATTTTCCTTTTCCTTTTCCTTTTTTCTCTTTATTTTCTTTAAATTGCTATGATAAG ATTGACTTGTTGGGTTGGACTTGAAACCATAAACATTGCACTCATTATGCGAGATTTTGTGTGGTCATTGCATTTCATTA TTGTCCTCTGTTTTTTTCTGAATCTTATCAATTATCATCACTAGTCTCTTTATCCATGGCCCTCAGTTTTAATACAAGAG ACTCCATGATACAGTGGCCATAAAAGTGTCTTGATCTACGCCGCATTTTGAAGAACCTACTTAAGCTTGTCTTGTAACAT AAGCGTTTGTGTATGTGTTGTTAGGATCCGAAAAATCCTAAAAGTGAAGTAAACGGAAGTAAAAATTATCCTGTATTGTA GGGAGTAAAGATACTTTTACTTAGATCCTTTATTCATATGTCACTTTGTTTCAATGCTGTACTTTTCCTTAAAGACATCA GTTTATGCAAGTGGATCATGTTTCTTTCTGACGTTGCATCTTGTTTACCTTTGACTTTTTTATATATACTTTTGTTTTTG GGTGAACCTTTAATGTGTTTTCTTCAAAGATGGAAATTTGTGGTTGTATGTAATTCTATTCCTTAGCTGAAAAGATATAG AAGGAAAACAAATAAGTAAGGAAAAAGAAAAAGGTTTTTTCTATCAAAGGACAAAAAAAATCTTGTACGCAAATTTAAAG AGCTTTCTTGCAAATTGATTTAACACATAACAGCAACATATACAAAATGTTACCTTTTATAACATGTAAAATCATAGTGC ATGCGTGGATCAGTTTTTAACATGTTCTACCACAGATTGACATCTTCCGCACTTTTGTCTTACACACCTTATATTTTTGG TTCCATATAGTACTGTGTAAGTATATTTTTTTCACAATACAGTTTTGGTCTCCATCACAGGATCAAGTAGTTGTGGTGAA GCAAGAAGTCCAGCTAGCACTCAATCCTTACAGGAAAGAAGCAACCAGGATGCTATGCGTTCTTCCGGGCCAAAGACAGA GGAGAACAAGATAAGATCTTCCAGAGCTGAGGTGGAGAATCTATGTAAGAAACCTAATCCTTCCCAAAACATGGGGAGGG ATTTTGGGACAAACCCAATGGAAGACATGCCTTGTGTGTTTACAAAAGGGGATGGCCCAAATGGTAAGAGAATTGAGGGA ATCTTATATAAATATGGGAAAGGGGAGGAAGTGAGGATAATGTGTGTGTGCCATGGGAACTTTCTGTCTCCTGCAGAGTT TGTTAAGCATGCTGGTGGTGGCGATGTTGCTCACCCACTTAGGCAGATTGTTGTAAACCCTTCTGGTGCTCCCTTTTTGT GATGGAGTCCCCCCTATTGTACTACAATCAGTAGCGCTGTAACATATAGGTTTTAATTGAAGAGAAGGAATGTTAGTTTG ATATCTTATTTAATTTGTTTCCAATTTTTTCTAAGCTTTTGAATGAAACAGTATTATATTGCCTCCCTTCAGGAGGTGAA TGCTTGATTCTTCACTTTGTACATGTTTGTTAGTTGATCATGTACTAGAGACAGAAAAAGAAAAGCTGAAAAAAAAATTC TTAGCTGCTGTTAAGATTCCCCCCCTTTAATTTAATAAATAATTGTTTTTTTAGTTATATATTTTCATTTAAAGTTATGA TTTGATTTGATTTGATTTTTTAAATAAGTTATGATGTGAAGTTATTAAACTGTCATTGATGTTAGTTTATTATTTTTGAA AGATTTAGGGTAAAGAAGATGACAACACATTAAGCACCCTGAATAAAAACAAATGAAACGGACAAAAAGAAGT
CDS sequence (LotjaGi2g1v0294100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGGAGAAGTACCCGAGAGATCTGCTTCAGAGATTCCTCGTGTCAAGTGGTGGCAGTGAGAAGATTGATAACAG AACGCAGACACAGACACAGCAACATCATCAGGGTGAAGAAGAAGAGGAGGAAGATGAAGGGATTGAGCTGCACCTGGGAC TCTCGTTGGGTGGAAGATTTGGGGTGGACAAGCATGCCAAGAACCAGCACCTTGTGCGCTCTTCCTCCGTTGTGGGGACA ATGCCTCTGCTCCGGGAGGATTCCGTGGCGGCGTCGCCGGCGTACTCGACCCTTGTGAGATCTTCATCGCTGCCATCGGA GACTGAGGAGGAGTGGAGGAAGCGGAAGAAGTTGCAGACGCTGCGGAGGATGGAGGCTAAGAGGAGGAGGTCGGAGAAGC AGAGAGGTTCCAAGTCGGAGAGAGATGTCGCCGGCGTGAGTTCCGGTGGTGGTGGTTTGGAGGAAGTGGAGGGTGCAGGT GCAAGTGCAATAACAATGGGGTTGAATAGACTTAGTTCTTCAACGGCGACGCCACCACCGTTTGGGTTGCCGAGTTGGGG TGTGGCGGGAAAGCAAGTTGTTCTTGGTGATGTTTTGGGGAAAGGGAAAGTTGGGGTTGGTTTTCAGGGGTTGTTTGCAC AACCATCTTCTCAGGGTTCATCAGCGGAATCCCAAGGGGGAAGCTCCTCATCAGTTTCTGAAATGGACAGCAAGCCTGTT CTAGGATCAAGTAGTTGTGGTGAAGCAAGAAGTCCAGCTAGCACTCAATCCTTACAGGAAAGAAGCAACCAGGATGCTAT GCGTTCTTCCGGGCCAAAGACAGAGGAGAACAAGATAAGATCTTCCAGAGCTGAGGTGGAGAATCTATGTAAGAAACCTA ATCCTTCCCAAAACATGGGGAGGGATTTTGGGACAAACCCAATGGAAGACATGCCTTGTGTGTTTACAAAAGGGGATGGC CCAAATGGTAAGAGAATTGAGGGAATCTTATATAAATATGGGAAAGGGGAGGAAGTGAGGATAATGTGTGTGTGCCATGG GAACTTTCTGTCTCCTGCAGAGTTTGTTAAGCATGCTGGTGGTGGCGATGTTGCTCACCCACTTAGGCAGATTGTTGTAA ACCCTTCTGGTGCTCCCTTTTTGTGA
Protein sequence (LotjaGi2g1v0294100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMEKYPRDLLQRFLVSSGGSEKIDNRTQTQTQQHHQGEEEEEEDEGIELHLGLSLGGRFGVDKHAKNQHLVRSSSVVGT MPLLREDSVAASPAYSTLVRSSSLPSETEEEWRKRKKLQTLRRMEAKRRRSEKQRGSKSERDVAGVSSGGGGLEEVEGAG ASAITMGLNRLSSSTATPPPFGLPSWGVAGKQVVLGDVLGKGKVGVGFQGLFAQPSSQGSSAESQGGSSSSVSEMDSKPV LGSSSCGEARSPASTQSLQERSNQDAMRSSGPKTEENKIRSSRAEVENLCKKPNPSQNMGRDFGTNPMEDMPCVFTKGDG PNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRQIVVNPSGAPFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 379 | 379 | 2.1E-153 | ||
| PANTHER | 1 | 379 | 379 | 2.1E-153 | – | |
| MobiDBLite | 17 | 48 | 32 | - | – | |
| MobiDBLite | 19 | 33 | 15 | - | – | |
| Pfam | 43 | 78 | 36 | 5.5E-15 | ||
| MobiDBLite | 94 | 158 | 65 | - | – | |
| Pfam | 98 | 237 | 140 | 4.2E-25 | ||
| Coils | 114 | 134 | 21 | - | – | |
| MobiDBLite | 125 | 140 | 16 | - | – | |
| MobiDBLite | 213 | 240 | 28 | - | – | |
| MobiDBLite | 213 | 302 | 90 | - | – | |
| MobiDBLite | 247 | 270 | 24 | - | – | |
| MobiDBLite | 271 | 287 | 17 | - | – | |
| Pfam | 307 | 372 | 66 | 1.9E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi2g1v0294100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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