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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0513000 |
| Transcript ID | LotjaGi1g1v0513000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ninja-family protein; TAIR: AT3G29575.1 ABI five binding protein 3; Swiss-Prot: sp|B6SM63|NNJA5_MAIZE Ninja-family protein 5; TrEMBL-Plants: tr|A0A0S3RRT6|A0A0S3RRT6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0513000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103496710..103501461) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGAAAAAACTAGATTCCGGGAAATAGAAGATATGCTAAATTGCTAATGCCTCCCTATATGCTTCTTTCTAAAAGGCA AAATAAAGAAAAGTGGGTTTTACCTTGGTCTTCTTCATGTCATGTCTATGTCTATGTTTATGTTATCTTCCAGCCAATAT GTGTCACGTTGTCATTCCATCACGTGGCGCCTCATCTCCTTTCCCTCCCATACCTTCGACACGTGTGCATGCCTCGAAAT TCACAAAACCAATGTCCCATCCTCCAAAGGGAAACACCCTCAAACAAAACAACAACATTAGCCTCGTACGCGCCACACGC TCCTCCCGCCACGTGTCCCCACTTGACTCCCTTTTCCATCCACATGTCGCCACCTTATCCCACAGGGACATTTTCGTCAT TTCACAAACCCCCAATTGCACAGTTTCAACACTCTCTCACTTCCCCTTCATCCGTTTTTGCTTTCAATGTTTTTTCACCT TTTTCTCTTCTTTCTCTGTATCTCTATATGCTTATGCTCATGCTGAAAACCTGGCAGAAAAAAATGTTGAATTTCTGGTT CCAAAGCCATTTGCTGTGATAACAGAACAACACTTGTCAATTTTTACATGGGAAAAACCATTGAATTTTGCTCCCTCTGA TGTCACTGTGTTGCATCATTATCAACTTTGAGTTACTACTATCTTGATCAAGTTCCCTGCATCACTTCAGGATTTTCCGG GGTTTCGTCAACTGGGTTTGTCTGTTAGTGAAGTTTCGTGGAAATTTCTCACCCCATGGCAGAGGTTGAAGACAGAGAAG AGGGTCGTCACATTTCTCCTCCTCCAACAACAGCAGCCCAAATGAGTGGTTTCCCGAGAGATCTGTTGAAGAGTTTCATG GCGGCGACGAACAATCACCTCCAGAAGCAGAAAATGAATTTGCCGGGGATGAAGGTGGAGGCGGAGCAACGTGATGCAGG GGAGAAGGAAGGAGCAGAGGAGGAGGAGTTAGAGCTGAGTCTTGGCCTTTCGATGAATGGTCGATTTGGGGTGGACCCGA ATGCGGCCAAGAAGATCAAGAGAACGACGTCGAAACCGGAGTTTGTGAACCAGGCGAGGAATGAGGAGATGGGGTATGCG GTGGCGCCGGTGTCGGCTTATGGCGGCGGTGGTAGCAGTGGAAGCGGATATGTCGGCGGTGGTGCTGGTGGTGGTGGTCA TCTGATCAGGACGTGTTCCCTTCCGACGGAGACAGAGGAAGAGTGGAGGAAGAGGAAGGAGTTGCAGACGCTGAGGAGAA TGGAGGCGAGGAGGAAGCGCTCGGAAAAGCAGCAGAGGAATTCGAGGAGGAATCATCGTGGGTTGTCTGAAGAGGTTGCT GCTGGTTCGGATGGGGGGAGCAATAATCTGGTGGAGCAAGGTGCAGGGGCTGGGGGTTTGAGCAGAACGGTGTCGTTGAC CACTCGTGTTGGTGGACTTGGTTTGAATGACAAGGAGAAGGGGAATGTGTTGCTTCTACCTCCATCGCCGCCTTCGATTG GTTCTTCTTCTCATGGAACAGGGTCTTCAGGGACATCAGAATCTGAGTCTCAACATGGTCAAGGTGAGTGATTGTGCTTC AATTTTGAGGTGTTTAATTGTTCATGCATTTGCTTTCTTTCTTGAATTGTGATTGTTTATTTTTAGGTTTTGAGTGCCTT TTTTCTTTCGAATTTGATGCCTTCATTTTAGGATTTTGGTCATCGATCAAGGCAGAATGTGGCCATCTATATTTAGGGTT CTTTTTTCTTTCAATTTAGATTTAGATACTAATTGGTTTTGGTTATATTAGATTGATCAAGATCGGTTATTGGATTGTAT TCTATTGTATTGTATTACTCTGTCACATGGTGGTAAGTCACTGACCATTGTCTTCACTGTCAAGGTTGATCATGCACTGT CATGTCTAGGGTTTTTAATTGCGGTTCTGGTTGTAGCTGCTGCTGGGTCACGGAATTGCAGACAAATGCGGTGCCTATGT GGCCGCAATTGCGGTCACGGTGCCTATGTGGCCACAATTACTGTTGTGGACCACAGTTTGAAACCACCACTGCAACTTGA AACCATGATCATGTCAGATCATGTCATTGTCTTTGCCTTTCCAGAATTGATAAAAGATTTGTCTTAGTTCCTTTTGACAA TTTTGCAAAACCCAACAAATCACTCTATAGGATAATCTAAGATGAAATTTCCATCTACTACTTTGAAATAATACAGATCT CCTATGTGTAGATGTTTTCATTCTTGGTGTCAGGTATGCACAGTCATTCAGAACTTCCAGCATAATTGTCCTGCCTTTTC TTTAATCCATTTTTATAATTACCTTAGATATAAGATTTTTCATTCGTAATTCCGGTGATAATTTTCTTTGATTGTTAAAT TTGCATTATTCATGGTGCTCATTCAACTAGTTTTTCATAGTAATTATTAAGGAAAGGAAGAATTTTATAAATTATTTGGT TGAGGATGACTGGAAGTTATTTATCTATACAAAATCAATTTCCAGATTCCTGATTTTGAAGTTAATGAACTCATGTTATA TGCCTGCTGATATTTGGAATATTAATAACTTCTATAACTAAACCCTCATTGCCAGTATGTATAGTGCATCACTATTCTAG GGTCCTGTCCTGTGTCCATATGTTGGGGAGGGAAGAGTCTAGAGTACTCTTATAGTGGGTGTTTGCTTCTATGTTGCACT CACACGCTGAGGGTTGGGGCATGTCAATGCAGGAAGCCTTACTGGCCAACGTCATAATTTACGTGGTTTTCATGCTATAC ATGCTATACGTGATACCGTGATGCGTTACCAAACATACTGATAGTTTATTTATTGTCTCCGACATTGATTCTATATTGGT GTGAGTGCCTTTAGATTGACCGTTATCTCTTGGAATAAATGCCTGGATTTTTGTGAAAACACCATCTGATGGCCTTCACG TGGCGTCCGCTTTAAATCCGAGCGCCCCGTCCATTTTAAACCCTAGCGACCCATTAAGAACGTGACGACACTGAAAAAAT TAAATTCTATCACATTTTGCTATCCGGTCTCATTTGCACATCTCTACTTGTGGTTCTGTTTTATTTGTTCAAGGGCAGCT AATTATGATACTTTTGGCAAATTTTATTTATAACAGTATGTTTTGTACTTTATTGTTCTTGACATAGGTTAAATTCTATT TATTACAATATGTTTCTACTTTATTGTTCTTGACATAGTTTATTAGTTCTCTTTATTTTACTCTACTATGCAGTGTTTTT GGTATACTTGTTGTATTCTATATATATGTATAATATTTTTATTTTAGCCACCATATTTGGCTCTGCATTGTGATTAGTGG ATTTTAGGATTCCCGCCTTAAAATTGCTATCAGCCATTAATAACATCACTTAGAACAAGATCTATAGTTTAATAATAGCT TCAGGCCCTCTGTGAAATCATTGAATTCCAAGTGCTACATGAAGAAAATCTACTTAATATTATCTGATCCTGTTTTCGAC TTCATGATATGTTGACTGACTGGGTTTTGGGATAACAGCATGCTAAGACTTAAGAACTTCACTTTCATTGTGAACAACTT TGAGATCAGGGTGATTATGGCCCCGTTTGGAAGAGCTTATTTGAGCTTATCTTATAACATATACTTGATTATGCAAGTGT TTGAGAGATCTTATGTGAATGGTGTATGACCTACTTATAAGCTTTTTCAAGCTTATTTTCATAAGCTGTTCAGATTAGCT TATGCTTACAAGTAAAATGTTTTCAGCTTATTTCAATATGCTTCTGAAATTAGATTATGTGATAGTGCTTAGTTAAGCTG TTTAACCAATAATCTATATCACTGTTTTGTAGCAGTGTCCTCTTAGCTTGTTTTGCTATAACTGGAGAAAACACAAATAT AAGCTTATTACATGATGTTTTTGGTATCTTCAATTAAAGTAATTTCCTAACTCATTTCTGCTATGCCTCAGGACCAACCC CAATGGACACTACAAGCCCAACTGGTGACAACATGTTGCAAAATGGTGAACTGAAATCACCAGCCACCTCAGGAGCCAGA GTTGCTGAAAACTCGGGCAAGATCGCTGCGGTGACAATGAGAACTCAGGCTAACGGACATCCACCTCTTCAAAACAGAAA CAAAGACACTGTGAAGAACATGTTGGAGGACATGCCCAGTGTATCCACCAAAGGAGTAGGCCCTAACGGGAAGAAAATAG AAGGGTTTCTCTACCGGTACTCCAAAGGCGAGGAAGTGAAGATCTTGTGCGTCTGCCATGGCCTTTTCATGACCCCAGCC GAGTTTGTTAAACATGCCGGTGGCGAGGATGTAGCCAACCCCTTGAAGCACATTGTTGTTAGTCCAAGCTTTTTGTAACT TGGGTGTGAGGCTGAAGAGAAAACCAGTGATGAGTGATCAAAATTTAACTTCATTAAATTTGCTCACCTTTAATACTCTC TAGTTTCCTGATTTGCATGTGATGTAGGAGTTTGGTAGTCCTTTGAAATCATAGATATTGTTATGGATCTGATTTCTTTC TTATTTGGGTATTCCTACCCTTTGCGACTTTAGGTCCCTTTTATGAGGGGACAAGGGTACTTGATAGAAATTGTAAGATT TCTATTAGTTTCTGTTAATCAATCATGTAGCTCAGATTGAATTGTATATATGGGCTGAAATCAATATCTACCTGTTTAGG GATATTGCTTTTTAAACATTCTTAATTTGCTA
CDS sequence (LotjaGi1g1v0513000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGGTTGAAGACAGAGAAGAGGGTCGTCACATTTCTCCTCCTCCAACAACAGCAGCCCAAATGAGTGGTTTCCC GAGAGATCTGTTGAAGAGTTTCATGGCGGCGACGAACAATCACCTCCAGAAGCAGAAAATGAATTTGCCGGGGATGAAGG TGGAGGCGGAGCAACGTGATGCAGGGGAGAAGGAAGGAGCAGAGGAGGAGGAGTTAGAGCTGAGTCTTGGCCTTTCGATG AATGGTCGATTTGGGGTGGACCCGAATGCGGCCAAGAAGATCAAGAGAACGACGTCGAAACCGGAGTTTGTGAACCAGGC GAGGAATGAGGAGATGGGGTATGCGGTGGCGCCGGTGTCGGCTTATGGCGGCGGTGGTAGCAGTGGAAGCGGATATGTCG GCGGTGGTGCTGGTGGTGGTGGTCATCTGATCAGGACGTGTTCCCTTCCGACGGAGACAGAGGAAGAGTGGAGGAAGAGG AAGGAGTTGCAGACGCTGAGGAGAATGGAGGCGAGGAGGAAGCGCTCGGAAAAGCAGCAGAGGAATTCGAGGAGGAATCA TCGTGGGTTGTCTGAAGAGGTTGCTGCTGGTTCGGATGGGGGGAGCAATAATCTGGTGGAGCAAGGTGCAGGGGCTGGGG GTTTGAGCAGAACGGTGTCGTTGACCACTCGTGTTGGTGGACTTGGTTTGAATGACAAGGAGAAGGGGAATGTGTTGCTT CTACCTCCATCGCCGCCTTCGATTGGTTCTTCTTCTCATGGAACAGGGTCTTCAGGGACATCAGAATCTGAGTCTCAACA TGGTCAAGGACCAACCCCAATGGACACTACAAGCCCAACTGGTGACAACATGTTGCAAAATGGTGAACTGAAATCACCAG CCACCTCAGGAGCCAGAGTTGCTGAAAACTCGGGCAAGATCGCTGCGGTGACAATGAGAACTCAGGCTAACGGACATCCA CCTCTTCAAAACAGAAACAAAGACACTGTGAAGAACATGTTGGAGGACATGCCCAGTGTATCCACCAAAGGAGTAGGCCC TAACGGGAAGAAAATAGAAGGGTTTCTCTACCGGTACTCCAAAGGCGAGGAAGTGAAGATCTTGTGCGTCTGCCATGGCC TTTTCATGACCCCAGCCGAGTTTGTTAAACATGCCGGTGGCGAGGATGTAGCCAACCCCTTGAAGCACATTGTTGTTAGT CCAAGCTTTTTGTAA
Protein sequence (LotjaGi1g1v0513000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEVEDREEGRHISPPPTTAAQMSGFPRDLLKSFMAATNNHLQKQKMNLPGMKVEAEQRDAGEKEGAEEEELELSLGLSM NGRFGVDPNAAKKIKRTTSKPEFVNQARNEEMGYAVAPVSAYGGGGSSGSGYVGGGAGGGGHLIRTCSLPTETEEEWRKR KELQTLRRMEARRKRSEKQQRNSRRNHRGLSEEVAAGSDGGSNNLVEQGAGAGGLSRTVSLTTRVGGLGLNDKEKGNVLL LPPSPPSIGSSSHGTGSSGTSESESQHGQGPTPMDTTSPTGDNMLQNGELKSPATSGARVAENSGKIAAVTMRTQANGHP PLQNRNKDTVKNMLEDMPSVSTKGVGPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVANPLKHIVVS PSFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | - | – | |
| PANTHER | 20 | 402 | 383 | 2.3E-92 | – | |
| PANTHER | 20 | 402 | 383 | 2.3E-92 | ||
| MobiDBLite | 44 | 70 | 27 | - | – | |
| Pfam | 68 | 102 | 35 | 7.0E-14 | ||
| Pfam | 143 | 264 | 122 | 6.5E-22 | ||
| MobiDBLite | 151 | 192 | 42 | - | – | |
| MobiDBLite | 151 | 214 | 64 | - | – | |
| Coils | 159 | 186 | 28 | - | – | |
| MobiDBLite | 227 | 301 | 75 | - | – | |
| MobiDBLite | 244 | 299 | 56 | - | – | |
| Pfam | 331 | 398 | 68 | 1.5E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi1g1v0513000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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