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IPR013951

Source: InterPro

Description

IPR013951 is a Histone deacetylation protein Rxt3.

<p>Rxt3 is a component of the Rpd3L histone deacetylase complex that is responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) [[cite:PUB00033324]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016575
Biological process Histone deacetylation The modification of histones by removal of acetyl groups.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj0g3v0221259.1
– RXT3-like protein [Medicago truncatula] gi|357504161|ref|XP_003622369.1|
Domains
4
LotjaGi2g1v0166600_LC.1
– Peptidyl-prolyl cis-trans isomerase G isoform 1; TAIR: AT5G08450.1 zinc finger CCCH domain protein; Swiss-Prot: sp|O94707|RXT3_SCHPO Transcriptional regulatory protein rxt3; TrEMBL-Plants: tr|A0A151QWG2|A0A151QWG2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0166600_LC
Domains
6
LotjaGi5g1v0196800.1
– Peptidyl-prolyl cis-trans isomerase G isoform 1; TAIR: AT5G08450.1 zinc finger CCCH domain protein; Swiss-Prot: sp|O94707|RXT3_SCHPO Transcriptional regulatory protein rxt3; TrEMBL-Plants: tr|A0A0S3SPX2|A0A0S3SPX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0196800
Domains
5
LotjaGi5g1v0196800.2
– Peptidyl-prolyl cis-trans isomerase G isoform 1; TAIR: AT5G08450.1 zinc finger CCCH domain protein; Swiss-Prot: sp|O94707|RXT3_SCHPO Transcriptional regulatory protein rxt3; TrEMBL-Plants: tr|K7N4V9|K7N4V9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0196800
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00