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IPR014906

Source: InterPro

Description

IPR014906 is a Pre-mRNA processing factor 4 (PRP4)-like.

<p>This small domain is found on PRP4 ribonuleoproteins. PRP4 is a U4/U6 small nuclear ribonucleoprotein that is involved in pre-mRNA processing [[cite:PUB00067985]]. It is also found in pre-mRNA-splicing factor 18 [[cite:PUB00067984]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj0g3v0242829.1
– PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max] gi|356504933|ref|XP_003521247.1|
Domains
10
Lj5g3v0868360.1
– PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein-like [Glycine max] gi|356500553|ref|XP_003519096.1|
Domains
22
LotjaGi4g1v0393300.1
– Pre-mRNA-splicing factor 18; TAIR: AT1G03140.1 splicing factor Prp18 family protein; Swiss-Prot: sp|Q99633|PRP18_HUMAN Pre-mRNA-splicing factor 18; TrEMBL-Plants: tr|I1JNV3|I1JNV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0393300
Domains
15
LotjaGi4g1v0393500.1
– Pre-mRNA-splicing factor 18; TAIR: AT1G03140.1 splicing factor Prp18 family protein; Swiss-Prot: sp|Q8BM39|PRP18_MOUSE Pre-mRNA-splicing factor 18; TrEMBL-Plants: tr|I1JNV3|I1JNV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0393500
Domains
14
LotjaGi5g1v0135200.1
– WD repeat-containing protein; TAIR: AT2G41500.1 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein; Swiss-Prot: sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein; TrEMBL-Plants: tr|I1JGD6|I1JGD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0135200
Domains
25
LotjaGi5g1v0135200.2
– WD repeat-containing protein; TAIR: AT2G41500.1 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein; Swiss-Prot: sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein; TrEMBL-Plants: tr|I1JGD6|I1JGD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0135200
Domains
25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67