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IPR015342 is a Peroxisomal ATPase PEX1, N-terminal C-lobe.
<p>The N-terminal domain of PEX1 adopts a double ψ β-barrel fold, similar in structure to the Cdc48 N-terminal domain. It has been suggested that this domain may be involved in interactions with ubiquitin, ubiquitin-like protein modifiers, or ubiquitin-like domains, such as Ubx. Furthermore, the domain may possess a putative adaptor or substrate binding site, allowing for peroxisomal biogenesis, membrane fusion and protein translocation [[cite:PUB00035447]]. This domain can be subdivided in N- and C-lobes. This entry represents the C-lobe.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. | ||
| Biological process | Peroxisome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1| | 10 | ||
| – | PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1| | 19 | ||
| – | ATP-dependent zinc metalloprotease FtsH 1; TAIR: AT5G08470.1 peroxisome 1; Swiss-Prot: sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1; TrEMBL-Plants: tr|I1KMB2|I1KMB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0086200 | 23 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00009 | CDD | 1 | 33.33 |