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IPR029067

Source: InterPro

Description

IPR029067 is a CDC48 domain 2-like superfamily.

<p>This superfamily represents the CDC48 domain 2-like domain, which can be found in the N-terminal of the peroxisome biogenesis factor 1 and the domain 2 of the AAA ATPases.</p> <p>CDC48 from yeasts is an AAA ATPase that is involved in protein export from the endoplasmic reticulum to the cytoplasm [[cite:PUB00069790]].</p> <p>Peroxisome biogenesis factor 1, also known as peroxin-1 or PEX1, is a component of the peroxisomal protein import machinery. In addition to its role in import, PEX1 together with PEX6, mediates the ATP-dependent relocation and recycling of the peroxisomal targeting signal-1 (PTS1) import receptor PEX5 from the peroxisomal membrane to the cytosol [[cite:PUB00057423], [cite:PUB00057424], [cite:PUB00057425]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 30

Transcript Name Description Predicted domains Domain count
Lj0g3v0125859.1
– PREDICTED: cell division cycle protein 48 homolog [Cicer arietinum] gi|502121999|ref|XP_004497529.1|
Domains
23
Lj0g3v0306179.1
– PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356543494|ref|XP_003540195.1|
Domains
13
Lj1g3v0342010.1
– PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356508699|ref|XP_003523092.1|
Domains
28
Lj1g3v4591140.1
– PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356572464|ref|XP_003554388.1|
Domains
7
Lj1g3v4591150.1
– Cell division control protein-like protein, partial [Medicago truncatula] gi|357510729|ref|XP_003625653.1|
Domains
10
Lj2g3v2925140.1
– PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1|
Domains
10
Lj3g3v3067920.1
– PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356543494|ref|XP_003540195.1|
Domains
27
Lj4g3v0451140.1
– PREDICTED: vesicle-fusing ATPase-like isoform X3 [Cicer arietinum] gi|502142631|ref|XP_004505053.1|
Domains
12
Lj4g3v0451140.2
– PREDICTED: vesicle-fusing ATPase-like [Glycine max] gi|356521353|ref|XP_003529321.1|
Domains
15
Lj4g3v0668230.1
– PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1|
Domains
19
Lj5g3v0657030.1
– Cell division control protein-like protein, partial [Medicago truncatula] gi|357510729|ref|XP_003625653.1|
Domains
10
LotjaGi1g1v0177300.1
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300
Domains
30
LotjaGi1g1v0177300.2
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300
Domains
30
LotjaGi1g1v0177300.4
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300
Domains
30
LotjaGi1g1v0177300.5
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300
Domains
30
LotjaGi1g1v0177300.6
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300
Domains
30
LotjaGi1g1v0177300.7
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300
Domains
30
LotjaGi1g1v0689100.1
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JPP3|I1JPP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0689100
Domains
30
LotjaGi1g1v0689100.2
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1NAA5|I1NAA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0689100
Domains
25
LotjaGi1g1v0689100.3
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1NAA5|I1NAA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0689100
Domains
25
LotjaGi3g1v0487400.1
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400
Domains
29
LotjaGi3g1v0487400.2
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400
Domains
29
LotjaGi3g1v0487400.3
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400
Domains
29
LotjaGi3g1v0487400.4
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400
Domains
29
LotjaGi3g1v0487400.5
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400
Domains
29
LotjaGi3g1v0487400.6
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400
Domains
29
LotjaGi4g1v0055600.1
– ATP-dependent zinc metalloprotease FtsH; TAIR: AT4G04910.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9M0Y8|NSF_ARATH Vesicle-fusing ATPase; TrEMBL-Plants: tr|A0A0L9TKH7|A0A0L9TKH7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055600
Domains
18
LotjaGi4g1v0086200.1
– ATP-dependent zinc metalloprotease FtsH 1; TAIR: AT5G08470.1 peroxisome 1; Swiss-Prot: sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1; TrEMBL-Plants: tr|I1KMB2|I1KMB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0086200
Domains
23
LotjaGi5g1v0081500.1
– Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E; TrEMBL-Plants: tr|I1JPP3|I1JPP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0081500
Domains
30
LotjaGi5g1v0081500.3
– ATP-dependent zinc metalloprotease FtsH; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A072VC98|A0A072VC98_MEDTR ATPase, AAA-type, CDC48 protein; Found in the gene: LotjaGi5g1v0081500
Domains
22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00009 CDD 1 3.33