Domain Predictions — View

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IPR016804

Source: InterPro

Description

IPR016804 is a Uncharacterised protein family UPF0114, plant.

<p>There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. Members of this entry are mainly found in proteobacteria.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1550460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_016710 [Theobroma cacao] gi\|508778128\|gb\|EOY25384.1\|	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE TMhelix TRANSMEMBRANE mobidb-lite	16
Lj3g3v0824890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome [Arabidopsis lyrata subsp]. lyrata] gi\|297807395\|ref\|XP_002871581.1\|	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE mobidb-lite	15
LotjaGi2g1v0348000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome protein; TAIR: AT4G19390.1 Uncharacterized protein family (UPF0114); Swiss-Prot: sp\|Q6ZWR6\|SYNE1_MOUSE Nesprin-1; TrEMBL-Plants: tr\|V7CIX1\|V7CIX1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0348000	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM TMhelix TRANSMEMBRANE mobidb-lite	16
LotjaGi3g1v0119900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome protein; TAIR: AT5G13720.1 Uncharacterized protein family (UPF0114); Swiss-Prot: sp\|P27816\|MAP4_HUMAN Microtubule-associated protein 4; TrEMBL-Plants: tr\|I3SM88\|I3SM88_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0119900	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF5 TMhelix TRANSMEMBRANE mobidb-lite	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00