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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1550460 |
| Transcript ID | Lj2g3v1550460.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein TCM_016710 [Theobroma cacao] gi|508778128|gb|EOY25384.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 3 | 13 | 11 | – | – | |
| Phobius | 14 | 21 | 8 | – | – | |
| PIRSF | 14 | 263 | 250 | 1.30E-75 | ||
| Phobius | 22 | 103 | 82 | – | – | |
| MobiDBLite | 55 | 77 | 23 | – | – | |
| PANTHER | 80 | 263 | 184 | 4.70E-114 | – | |
| PANTHER | 80 | 263 | 184 | 4.70E-114 | – | |
| Pfam | 99 | 231 | 133 | 9.20E-37 | ||
| Phobius | 104 | 129 | 26 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 130 | 149 | 20 | – | – | |
| TMHMM | 149 | 171 | 23 | – | – | |
| Phobius | 150 | 170 | 21 | – | – | |
| Phobius | 171 | 211 | 41 | – | – | |
| Phobius | 212 | 229 | 18 | – | – | |
| Phobius | 230 | 240 | 11 | – | – | |
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 241 | 260 | 20 | – | – | |
| Phobius | 261 | 263 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v1550460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1550460.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.