Domain Predictions — View

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PTHR31721

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0272519.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_033965 [Theobroma cacao] gi\|508722757\|gb\|EOY14654.1\|	Domains CYTOPLASMIC_DOMAIN IPR005134 NON_CYTOPLASMIC_DOMAIN PF03350 PTHR31721 PTHR31721:SF3 TMhelix TRANSMEMBRANE	8
Lj2g3v1550460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_016710 [Theobroma cacao] gi\|508778128\|gb\|EOY25384.1\|	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE TMhelix TRANSMEMBRANE mobidb-lite	16
Lj3g3v0824890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome [Arabidopsis lyrata subsp]. lyrata] gi\|297807395\|ref\|XP_002871581.1\|	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE mobidb-lite	15
LotjaGi2g1v0348000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome protein; TAIR: AT4G19390.1 Uncharacterized protein family (UPF0114); Swiss-Prot: sp\|Q6ZWR6\|SYNE1_MOUSE Nesprin-1; TrEMBL-Plants: tr\|V7CIX1\|V7CIX1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0348000	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM TMhelix TRANSMEMBRANE mobidb-lite	16
LotjaGi3g1v0119900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome protein; TAIR: AT5G13720.1 Uncharacterized protein family (UPF0114); Swiss-Prot: sp\|P27816\|MAP4_HUMAN Microtubule-associated protein 4; TrEMBL-Plants: tr\|I3SM88\|I3SM88_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0119900	Domains CYTOPLASMIC_DOMAIN IPR005134 IPR016804 NON_CYTOPLASMIC_DOMAIN PF03350 PIRSF022348 PTHR31721 PTHR31721:SF5 TMhelix TRANSMEMBRANE mobidb-lite	11
LotjaGi5g1v0023400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural constituent of ribosome protein; TAIR: AT4G19390.1 Uncharacterized protein family (UPF0114); Swiss-Prot: sp\|Q6Q876\|SIRA_LEPMC Multidrug resistance protein sirA; TrEMBL-Plants: tr\|I3SHR3\|I3SHR3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0023400	Domains CYTOPLASMIC_DOMAIN IPR005134 NON_CYTOPLASMIC_DOMAIN PF03350 PTHR31721 PTHR31721:SF3 TMhelix TRANSMEMBRANE	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	16.67