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IPR019050

Source: InterPro

Description

IPR019050 is a FDF domain.

<p>The FDF domain, so called because of the conserved FDF at its N termini, is an entirely α-helical domain with multiple exposed hydrophilic loops [[cite:PUB00043768]]. It is found at the C terminus of Scd6p-like SM domains [[cite:PUB00043768], [cite:PUB00044226]]. It is also found with other divergent Sm domains and in proteins such as Dcp3p and FLJ21128, where it is found N-terminal to the YjeF-N domain, a novel Rossmann fold domain [[cite:PUB00043768]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
Lj2g3v1550560.1
– LSM14-like protein [Medicago truncatula] gi|357484411|ref|XP_003612493.1|
Domains
13
Lj2g3v1550560.2
– PREDICTED: decapping 5-like protein-like isoform X1 [Cicer arietinum] gi|502161923|ref|XP_004512330.1|
Domains
16
LotjaGi2g1v0282700.1
– Decapping 5; TAIR: AT1G26110.2 decapping 5; Swiss-Prot: sp|Q9C658|DCP5_ARATH Protein decapping 5; TrEMBL-Plants: tr|A0A1J7GP68|A0A1J7GP68_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0282700
Domains
19
LotjaGi2g1v0348300_LC.1
– Protein decapping 5; TAIR: AT1G26110.2 decapping 5; Swiss-Prot: sp|Q9C658|DCP5_ARATH Protein decapping 5; TrEMBL-Plants: tr|A0A151SHY7|A0A151SHY7_CAJCA Protein LSM14 isogeny B; Found in the gene: LotjaGi2g1v0348300_LC
Domains
7
LotjaGi5g1v0268600.1
– Decapping 5; TAIR: AT1G26110.1 decapping 5; Swiss-Prot: sp|Q9C658|DCP5_ARATH Protein decapping 5; TrEMBL-Plants: tr|G7I4Y0|G7I4Y0_MEDTR Protein decapping-like protein; Found in the gene: LotjaGi5g1v0268600
Domains
19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 20.00