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IPR021933

Source: InterPro

Description

IPR021933 is a SERRATE/Ars2, N-terminal.

<p>This domain can be found in the N terminus of the SERRATE (SE) from plants and its homologue, Ars2, from animals. They play a role in nuclear RNA metabolism. They interact with the nuclear cap-binding complex (CBC) and mediates interactions with diverse RNA processing and transport machineries in a transcript-dependent manner. Interestingly, the plant SERRATE does not have the RNA recognition motif (RRM) domain found in metazoans and S. pombe [[cite:PUB00090022]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj0g3v0104559.1
– PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1|
Domains
10
Lj3g3v0797560.1
– PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1|
Domains
10
Lj3g3v0797560.2
– PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1|
Domains
10
Lj3g3v1739290.1
– PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1|
Domains
9
Lj3g3v1739290.2
– PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1|
Domains
9
LotjaGi3g1v0101300.1
– Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7KJV0|K7KJV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0101300
Domains
11
LotjaGi3g1v0101300.2
– Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7KJV0|K7KJV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0101300
Domains
11
LotjaGi3g1v0307600.1
– Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|A0A151R5X6|A0A151R5X6_CAJCA Serrate RNA effector molecule isogeny; Found in the gene: LotjaGi3g1v0307600
Domains
11
LotjaGi3g1v0313400_LC.2
– Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7L882|K7L882_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0313400_LC
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 11.11