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IPR022209

Source: InterPro

Description

IPR022209 is a Pre-mRNA splicing factor.

<p>This domain family is found in eukaryotes, and is approximately 100 amino acids in length. The family is found in association with [pfam:PF10197]. There is a single completely conserved residue Y that may be functionally important. Cwc25 has been identified to associate with pre-mRNA splicing factor Cef1/Ntc85, a component of the Prp19-associated complex (NTC) involved in spliceosome activation. Cwc25 is neither tightly associated with NTC nor required for spliceosome activation, but is required for the first catalytic reaction.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Lj4g3v0073700.1
– PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Cicer arietinum] gi|502079915|ref|XP_004486406.1|
Domains
8
LotjaGi6g1v0278500.1
– Pre-mRNA-splicing factor cwc25; TAIR: AT2G44200.1 pre-mRNA splicing factor domain-containing protein; Swiss-Prot: sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog; TrEMBL-Plants: tr|I3SJK5|I3SJK5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0278500
Domains
8
LotjaGi6g1v0278500.2
– Pre-mRNA-splicing factor cwc25; TAIR: AT2G44200.1 pre-mRNA splicing factor domain-containing protein; Swiss-Prot: sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog; TrEMBL-Plants: tr|I3S5Q7|I3S5Q7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0278500
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 33.33