Domain Predictions — View

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IPR024228

Source: InterPro

Description

IPR024228 is a Regulatory protein NPR, central domain.

<p>This domain can be found in the plant NPR proteins. Arabidopsis NPR1 is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway [[cite:PUB00075443]]. Its paralogs, NPR3, and NPR4, bind SA and control the proteasome-mediated degradation of NPR1 through their interaction with NPR1 [[cite:PUB00075444]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4154950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BTB/POZ ankyrin repeat protein [Lotus japonicus] gi\|343794556\|gb\|AEM62768.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR024228 PF00651 PF11900 PF12796 PS50088 PS50097 PS50297 PTHR24413 PTHR24413:SF126 SM00225 SM00248 SSF48403 SSF54695 cd00204 mobidb-lite	21
Lj1g3v4155980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	BTB/POZ ankyrin repeat protein [Lotus japonicus] gi\|343794556\|gb\|AEM62768.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR024228 PF00651 PF11900 PF12796 PS50088 PS50097 PS50297 PTHR24413 PTHR24413:SF126 SM00225 SM00248 SSF48403 SSF54695 cd00204 mobidb-lite	21
Lj2g3v3073980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: regulatory protein NPR3-like [Glycine max] gi\|356553915\|ref\|XP_003545296.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR021094 IPR024228 PF00651 PF11900 PF12313 PF12796 PS50088 PS50097 PS50297 PTHR24413 PTHR24413:SF78 SM00225 SM00248 SSF48403 SSF54695 cd00204	22
Lj2g3v3073980.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: regulatory protein NPR3-like [Glycine max] gi\|356553915\|ref\|XP_003545296.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR021094 IPR024228 PF00651 PF11900 PF12313 PF12796 PS50088 PS50097 PS50297 PTHR24413 PTHR24413:SF78 SM00225 SM00248 SSF48403 SSF54695 cd00204	22
LotjaGi1g1v0045800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulatory protein NPR1; TAIR: AT5G45110.1 NPR1-like protein 3; Swiss-Prot: sp\|Q0JJ01\|NPR2_ORYSJ BTB/POZ domain and ankyrin repeat-containing protein NPR2; TrEMBL-Plants: tr\|I1M705\|I1M705_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0045800	Domains Coil G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR021094 IPR024228 IPR036770 PF00651 PF11900 PF12313 PF12796 PS50088 PS50097 PS50297 PTHR46475 PTHR46475:SF7 SM00225 SM00248 SSF48403 SSF54695 cd18310 mobidb-lite	25
LotjaGi1g1v0664600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat family protein / BTB/POZ domain-containing protein; TAIR: AT2G41370.1 Ankyrin repeat family protein / BTB/POZ domain-containing protein; Swiss-Prot: sp\|Q9ZVC2\|NPR5_ARATH Regulatory protein NPR5; TrEMBL-Plants: tr\|G3LSH3\|G3LSH3_LOTJA BTB/POZ ankyrin repeat protein; Found in the gene: LotjaGi1g1v0664600	Domains G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR024228 IPR036770 PF00651 PF11900 PF12796 PS50088 PS50097 PS50297 PTHR46668 PTHR46668:SF3 SM00225 SM00248 SSF48403 SSF54695 cd18310 mobidb-lite	22
LotjaGi1g1v0664600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat family protein / BTB/POZ domain-containing protein; TAIR: AT2G41370.1 Ankyrin repeat family protein / BTB/POZ domain-containing protein; Swiss-Prot: sp\|Q9ZVC2\|NPR5_ARATH Regulatory protein NPR5; TrEMBL-Plants: tr\|G3LSH3\|G3LSH3_LOTJA BTB/POZ ankyrin repeat protein; Found in the gene: LotjaGi1g1v0664600	Domains G3DSA:1.25.40.20 G3DSA:3.30.710.10 IPR000210 IPR002110 IPR011333 IPR020683 IPR024228 IPR036770 PF00651 PF11900 PF12796 PS50088 PS50097 PS50297 PTHR46668 PTHR46668:SF3 SM00225 SM00248 SSF48403 SSF54695 cd18310	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd18310	CDD	1	14.29