Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR024794 is a Large ribosomal subunit protein eL15 core domain superfamily.
<p>A number of eukaryotic and archaebacterial ribosomal proteins can be grouped on the basis of sequence similarities [[cite:PUB00000245]]. One of these families consists of:</p> <ul> <li>Mammalian eL15.</li> <li>Insect eL15.</li> <li>Plant eL15y/z.</li> <li>Yeast eL15A/B.</li> <li>Archaebacterial eL15.</li> </ul> <p>These ribosomal proteins have a structure corresponding to a 3-layer (α-β-α) sandwich.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. | ||
| Cellular component | Ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502176589|ref|XP_004515893.1| | 12 | ||
| – | 60S ribosomal protein L15 [Zea mays] gi|226496391|ref|NP_001150386.1| | 11 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3SAW7|I3SAW7_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi2g1v0421500 | 12 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3SAW7|I3SAW7_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi2g1v0421500 | 12 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3SAW7|I3SAW7_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi2g1v0421500 | 12 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3SAW7|I3SAW7_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi2g1v0421500 | 12 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3T391|I3T391_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi4g1v0201500 | 12 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3T391|I3T391_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi4g1v0201500 | 12 | ||
| – | Ribosomal protein L15; TAIR: AT4G16720.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|O82528|RL15_PETHY 60S ribosomal protein L15; TrEMBL-Plants: tr|I3T391|I3T391_LOTJA Ribosomal protein L15; Found in the gene: LotjaGi4g1v0201500 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 11.11 |