Domain Predictions — View

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IPR025423

Source: InterPro

Description

IPR025423 is a TMEM205-like.

<p>This entry represents a transmembrane domain found in TMEM205 from animals [[cite:PUB00154374]], its homologue from yeast YPR098C and in uncharacterised bacterial sequences. This domain is functionally uncharacterised.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v3754400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transmembrane protein 205-like [Glycine max] gi\|356526463\|ref\|XP_003531837.1\|	Domains CYTOPLASMIC_DOMAIN IPR025423 NON_CYTOPLASMIC_DOMAIN PF13664 PTHR23241 PTHR23241:SF50 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix TRANSMEMBRANE mobidb-lite	16
Lj5g3v1600750.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transmembrane protein 205-like [Cicer arietinum] gi\|502117720\|ref\|XP_004495913.1\|	Domains CYTOPLASMIC_DOMAIN IPR025423 NON_CYTOPLASMIC_DOMAIN PF13664 PTHR23241 PTHR23241:SF55 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_EUK TMhelix TRANSMEMBRANE	13
LotjaGi3g1v0556500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein (LEA) family protein; TAIR: AT1G22600.1 Late embryogenesis abundant protein (LEA) family protein; Swiss-Prot: sp\|Q91XE8\|TM205_MOUSE Transmembrane protein 205; TrEMBL-Plants: tr\|A0A0L9V8B7\|A0A0L9V8B7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556500	Domains CYTOPLASMIC_DOMAIN IPR025423 NON_CYTOPLASMIC_DOMAIN PF13664 PTHR47652 PTHR47652:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	15
LotjaGi5g1v0246300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane protein 205; TAIR: AT3G62580.1 Late embryogenesis abundant protein (LEA) family protein; Swiss-Prot: sp\|Q6GPW4\|TM205_XENLA Transmembrane protein 205; TrEMBL-Plants: tr\|I3SAD0\|I3SAD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0246300	Domains CYTOPLASMIC_DOMAIN IPR025423 NON_CYTOPLASMIC_DOMAIN PF13664 PTHR23241 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM TMhelix TRANSMEMBRANE	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	25.00