Domain Predictions — View

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IPR033932

Source: InterPro

Description

IPR033932 is a YtcJ like.

<p>This entry includes YtcJ_like metal dependent amidohydrolases and homologues. YtcJ is a Bacillus subtilis ORF of unknown function [[cite:PUB00081791]]. The Arabidopsis homologue LAF3 has been identified as a factor required for photochrome A signalling [[cite:PUB00081790]]. This entry also includes N-substituted formamide deformylase nfdA from Arthrobacter pascens [[cite:PUB00090167]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0258539.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LAF3 isoform [Medicago truncatula] gi\|357456493\|ref\|XP_003598527.1\|	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR011059 IPR013108 IPR032466 IPR033932 PF07969 PTHR22642 PTHR22642:SF2 SSF51556 cd01300	11
Lj0g3v0258539.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LAF3 isoform [Medicago truncatula] gi\|357456493\|ref\|XP_003598527.1\|	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR011059 IPR013108 IPR032466 IPR033932 NON_CYTOPLASMIC_DOMAIN PF07969 PTHR22642 PTHR22642:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 TMhelix cd01300	18
LotjaGi3g1v0318200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phosphomethylpyrimidine synthase; TAIR: AT3G55850.1 Amidohydrolase family; Swiss-Prot: sp\|O34355\|YTCJ_BACSU Putative amidohydrolase YtcJ; TrEMBL-Plants: tr\|K7M0Q9\|K7M0Q9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0318200	Domains G3DSA:2.30.40.10 G3DSA:3.10.310.70 G3DSA:3.20.20.140 IPR011059 IPR013108 IPR032466 IPR033932 PF07969 PTHR22642 PTHR22642:SF2 SSF51556 cd01300	12
LotjaGi3g1v0318200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Amidohydrolase family; TAIR: AT3G55850.5 Amidohydrolase family; Swiss-Prot: sp\|O34355\|YTCJ_BACSU Putative amidohydrolase YtcJ; TrEMBL-Plants: tr\|K7M0Q9\|K7M0Q9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0318200	Domains G3DSA:2.30.40.10 G3DSA:3.10.310.70 G3DSA:3.20.20.140 IPR011059 IPR013108 IPR032466 IPR033932 NON_CYTOPLASMIC_DOMAIN PF07969 PTHR22642 PTHR22642:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 TMhelix cd01300	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01300	CDD	1	25.00