Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR034215 is a RBM42, RNA recognition motif.
<p>This entry represents the RNA recognition motif (RRM) of RBM42 which has been identified as a heterogeneous nuclear ribonucleoprotein K (hnRNP K)-binding protein. It also directly binds the 3' untranslated region of p21 mRNA that is one of the target mRNAs for hnRNP K. Both, hnRNP K and RBM42, are components of stress granules (SGs). Under nonstress conditions, RBM42 predominantly localizes within the nucleus and co-localizes with hnRNP K. Under stress conditions, hnRNP K and RBM42 form cytoplasmic foci where the SG marker TIAR localizes, and may play a role in the maintenance of cellular ATP level by protecting their target mRNAs. RBM42 contains an RNA recognition motif (RRM) [[cite:PUB00082891]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RNA-binding protein; TAIR: AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q66KL9|RBM42_XENTR RNA-binding protein 42; TrEMBL-Plants: tr|A0A151SD72|A0A151SD72_CAJCA RNA-binding protein 42; Found in the gene: LotjaGi4g1v0195600 | 13 | ||
| – | RNA-binding protein; TAIR: AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42; TrEMBL-Plants: tr|A0A151U5K0|A0A151U5K0_CAJCA RNA-binding protein 42; Found in the gene: LotjaGi5g1v0208400 | 13 | ||
| – | RNA-binding protein; TAIR: AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q6AXT7|RBM42_RAT RNA-binding protein 42; TrEMBL-Plants: tr|A0A151U5K0|A0A151U5K0_CAJCA RNA-binding protein 42; Found in the gene: LotjaGi5g1v0208400 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 33.33 |