Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR034871

Source: InterPro

Description

IPR034871 is a Allene oxide cyclase superfamily.

<p>This superfamily consists of several plant specific allene oxide cyclase proteins ([ec:5.3.99.6]). The allene oxide cyclase (AOC)-catalysed step in jasmonate (JA) biosynthesis is important in the wound response of tomato [[cite:PUB00012334]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009695
Biological process Jasmonic acid biosynthetic process The chemical reactions and pathways resulting in the formation of jasmonic acid, a fatty acid derivative.
Subterm of
GO:0046423
Molecular function Allene-oxide cyclase activity Catalysis of the reaction: (9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate = (15Z)-12-oxophyto-10,15-dienoate.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0690000.1
– Allene oxide cyclase; TAIR: AT1G13280.1 allene oxide cyclase 4; Swiss-Prot: sp|A2XID3|AOC_ORYSI Allene oxide cyclase, chloroplastic; TrEMBL-Plants: tr|F6KBT6|F6KBT6_SOYBN Allene oxide cyclase 6; Found in the gene: LotjaGi1g1v0690000
Domains
7
LotjaGi2g1v0054900.1
– Allene-oxide cyclase; TAIR: AT3G25770.1 allene oxide cyclase 2; Swiss-Prot: sp|A2XID3|AOC_ORYSI Allene oxide cyclase, chloroplastic; TrEMBL-Plants: tr|I3SEB3|I3SEB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0054900
Domains
8
LotjaGi2g1v0280800.1
– Allene oxide cyclase; TAIR: AT1G13280.1 allene oxide cyclase 4; Swiss-Prot: sp|A2XID3|AOC_ORYSI Allene oxide cyclase, chloroplastic; TrEMBL-Plants: tr|I3SLX3|I3SLX3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0280800
Domains
9
LotjaGi6g1v0012100.4
– Dirigent protein; TAIR: AT4G13580.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9T0H8|DIR18_ARATH Dirigent protein 18; TrEMBL-Plants: tr|A0A072VHX9|A0A072VHX9_MEDTR Dirigent protein; Found in the gene: LotjaGi6g1v0012100
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR46215:SF11 PANTHER 1 25.00