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IPR036227 is a Large ribosomal subunit protein uL15/eL18 superfamily.
<p>Large ribosomal subunit proteins uL15/eL18 share a common structure consisting mainly of parallel β sheets (β-α-β units) with a core of three turns of irregular (β-β-α)n superhelix [[cite:PUB00041215], [cite:PUB00034484]]. This superfamily includes his entry includes uL15 proteins that were known as L15 from bacteria, L28 from yeast, and L27A from higher eukaryotes, fungal mitochondrial uL15m (previously L10), mitochondrial uL15m (MRLP15), and eL18 proteins from archaea and eukaryotes.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | 50S ribosomal L15-like protein; TAIR: AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|A9H3K5|RL15_GLUDA 50S ribosomal protein L15; TrEMBL-Plants: tr|A0A072USD9|A0A072USD9_MEDTR 50S ribosomal L15-like protein; Found in the gene: LotjaGi1g1v0405400 | 17 | ||
| – | 50S ribosomal L15-like protein; TAIR: AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|A9H3K5|RL15_GLUDA 50S ribosomal protein L15; TrEMBL-Plants: tr|A0A072USD9|A0A072USD9_MEDTR 50S ribosomal L15-like protein; Found in the gene: LotjaGi1g1v0405400 | 17 | ||
| – | 50S ribosomal L15-like protein; TAIR: AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|A9H3K5|RL15_GLUDA 50S ribosomal protein L15; TrEMBL-Plants: tr|A0A072VEX9|A0A072VEX9_MEDTR 50S ribosomal L15-like protein; Found in the gene: LotjaGi1g1v0405400 | 17 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|I3SYW4|I3SYW4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0763800 | 8 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|I3SYW4|I3SYW4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0763800 | 8 | ||
| – | 60S ribosomal protein L18; TAIR: AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|Q940B0|RL183_ARATH 60S ribosomal protein L18-3; TrEMBL-Plants: tr|I3TAM1|I3TAM1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0769700 | 8 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|I3TAM1|I3TAM1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0769700 | 8 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|I3TAM1|I3TAM1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0769700 | 8 | ||
| – | 60S ribosomal protein L27a, putative; TAIR: AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|P49637|R27A3_ARATH 60S ribosomal protein L27a-3; TrEMBL-Plants: tr|I3SX58|I3SX58_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0324700 | 12 | ||
| – | 60S ribosomal protein L27a, putative; TAIR: AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|P49637|R27A3_ARATH 60S ribosomal protein L27a-3; TrEMBL-Plants: tr|I3SX58|I3SX58_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0324700 | 12 | ||
| – | 60S ribosomal protein L27A; TAIR: AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|P49637|R27A3_ARATH 60S ribosomal protein L27a-3; TrEMBL-Plants: tr|I3S7K3|I3S7K3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0158100 | 12 | ||
| – | 60S ribosomal protein L27A; TAIR: AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|P49637|R27A3_ARATH 60S ribosomal protein L27a-3; TrEMBL-Plants: tr|K4C8P4|K4C8P4_SOLLC Uncharacterized protein; Found in the gene: LotjaGi4g1v0229500 | 12 | ||
| – | 60S ribosomal protein L27A; TAIR: AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein; Swiss-Prot: sp|P49637|R27A3_ARATH 60S ribosomal protein L27a-3; TrEMBL-Plants: tr|K4C8P4|K4C8P4_SOLLC Uncharacterized protein; Found in the gene: LotjaGi4g1v0229500 | 12 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|A0A1J7GRW1|A0A1J7GRW1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0225500 | 8 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|A0A1J7HJJ9|A0A1J7HJJ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0225500 | 8 | ||
| – | 60S ribosomal protein L18; TAIR: AT3G05590.1 ribosomal protein L18; Swiss-Prot: sp|P42791|RL182_ARATH 60S ribosomal protein L18-2; TrEMBL-Plants: tr|A0A067HGY8|A0A067HGY8_CITSI Uncharacterized protein; Found in the gene: LotjaGi5g1v0225500 | 8 | ||
| – | 50S ribosomal protein L15; TAIR: AT3G25920.1 ribosomal protein L15; Swiss-Prot: sp|P31165|RK15_PEA 50S ribosomal protein L15, chloroplastic; TrEMBL-Plants: tr|I3S518|I3S518_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0339800 | 14 | ||
| – | 50S ribosomal protein L15; TAIR: AT3G25920.1 ribosomal protein L15; Swiss-Prot: sp|P31165|RK15_PEA 50S ribosomal protein L15, chloroplastic; TrEMBL-Plants: tr|I3S518|I3S518_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0339800 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF52080 | SUPERFAMILY | 1 | 5.56 |