Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR036280

Description

IPR036280 is a Multiheme cytochrome superfamily.

<p>In proteins belonging to the c-type cytochrome family [[cite:PUB00004931]], the haem group is covalently attached by thioether bonds to two conserved cysteine residues located in the cytochrome c centre. Cytochromes c typically function in electron transfer, but c-type cytochrome centres are also found in the active sites of many enzymes.</p> <p>This domain contains multiple CxxCH motifs. There are a variable number of helices, as well as a little β structure present in multihaem cytochromes, but they do not form a true structural fold. Cytochrome (cyt) c3-like proteins are multihaem cytochromes, including cyt c3 with four haem groups [[cite:PUB00014110]], cyt c7 (cyt c551.5) with three haem groups (deletion of one cyt c3 haem-binding site), nine-haem cyt c (tandem repeat of two cyt c3-like domains with an additional haem-binding site), and 16-haem cyt c HmcA (tandem repeat of four cyt c3-like domains). The photosynthetic reaction centre composed of a cytochrome subunit is also a multihaem cytochrome [[cite:PUB00014111]]. In addition, the di-haem elbow motif shows a similar structure, the main characteristic feature of this motif being the packing of its two haems; many members of this group of proteins contain one or more complete motifs flanked by incomplete motifs and/or other domains. For example, the di-haem elbow motif is present in the multihaem cytochrome domain found in the periplasmic nitrate reductase subunit NapB [[cite:PUB00014112]], in hydroxylamine oxioreductase HAO (contains 3 complete motifs), in cyt c554 (contains one complete motif), in cyt c nitrite reductase, and in the N-terminal domain of flavocytochrome c3 (respiratory fumarate reductase).</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
Zinc finger protein LSD1; TAIR: AT1G32540.2 lsd one like 1; Swiss-Prot: sp|Q93ZB1|LOL1_ARATH Protein LOL1; TrEMBL-Plants: tr|I3S8Z8|I3S8Z8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0188000 8
Zinc finger protein LSD1; TAIR: AT1G32540.2 lsd one like 1; Swiss-Prot: sp|Q0J7V9|LSD1_ORYSJ Protein LSD1; TrEMBL-Plants: tr|I3S8Z8|I3S8Z8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0188000 11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 50.00