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IPR037363

Source: InterPro

Description

IPR037363 is a Sec13/Seh1 family.

<p>Seh1 and Sec13 are WD40 repeat containing proteins. They are subunits of the Nup84 (Nup107-160 complex in higher eukaryotes) nuclear pore subcomplex [[cite:PUB00087164]] and the the SEA complex (GATOR1 complex in higher eukaryotes) [[cite:PUB00063317], [cite:PUB00087165], [cite:PUB00087166]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005198
Molecular function Structural molecule activity The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell.
Subterm of

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0024900.1
– Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPN0|D7UPN0_LOTJA SEC13 family protein; Found in the gene: LotjaGi1g1v0024900
Domains
15
LotjaGi1g1v0024900.2
– Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPN0|D7UPN0_LOTJA SEC13 family protein; Found in the gene: LotjaGi1g1v0024900
Domains
15
LotjaGi2g1v0440600.1
– Protein transport protein SEC13; TAIR: AT1G64350.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q93VR9|SEH1_ARATH Protein SEH1; TrEMBL-Plants: tr|D7UPM8|D7UPM8_LOTJA WD40 repeat nucleoporin similar to SEH1; Found in the gene: LotjaGi2g1v0440600
Domains
14
LotjaGi6g1v0154500.1
– Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPM9|D7UPM9_LOTJA SEC13 family protein; Found in the gene: LotjaGi6g1v0154500
Domains
15
LotjaGi6g1v0154500.2
– Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPM9|D7UPM9_LOTJA SEC13 family protein; Found in the gene: LotjaGi6g1v0154500
Domains
15
LotjaGi6g1v0154500.3
– Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPM9|D7UPM9_LOTJA SEC13 family protein; Found in the gene: LotjaGi6g1v0154500
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF50978 SUPERFAMILY 1 16.67