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IPR037700 is a Nucleoporin NUP88/NUP82.
<p>This entry include a nucleoporin known as NUP88 in animals and NUP82 in fission and budding yeasts. NUP88 is a component of the nuclear pore complex (NPC), which is the only means by which macromolecules enter and exit the nucleus [[cite:PUB00044407]]. NUP82 is also a component of the NPC subcomplex (with NUP159 and NSP1) which tethers nucleoporins to the nuclear membrane [[cite:PUB00087491]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ribosomal large subunit export from nucleus | The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm. | ||
| Biological process | Ribosomal small subunit export from nucleus | The directed movement of a ribosomal small subunit from the nucleus into the cytoplasm. | ||
| Biological process | Nucleocytoplasmic transport | The directed movement of molecules between the nucleus and the cytoplasm. | ||
| Molecular function | Structural constituent of nuclear pore | The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Nuclear pore complex-like protein; TAIR: AT5G05680.1 nuclear pore complex protein-like protein; Swiss-Prot: sp|Q9FFK6|NUP88_ARATH Nuclear pore complex protein NUP88; TrEMBL-Plants: tr|A0A151U9I0|A0A151U9I0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0073400 | 6 | ||
| – | Nuclear pore complex-like protein; TAIR: AT5G05680.1 nuclear pore complex protein-like protein; Swiss-Prot: sp|Q9FFK6|NUP88_ARATH Nuclear pore complex protein NUP88; TrEMBL-Plants: tr|A0A151U9I0|A0A151U9I0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0073400 | 6 | ||
| – | Nuclear pore complex-like protein; TAIR: AT5G05680.1 nuclear pore complex protein-like protein; Swiss-Prot: sp|Q9FFK6|NUP88_ARATH Nuclear pore complex protein NUP88; TrEMBL-Plants: tr|A0A151U9I0|A0A151U9I0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0073400 | 6 | ||
| – | Nuclear pore complex-like protein; TAIR: AT5G05680.1 nuclear pore complex protein-like protein; Swiss-Prot: sp|Q9FFK6|NUP88_ARATH Nuclear pore complex protein NUP88; TrEMBL-Plants: tr|A0A151U9I0|A0A151U9I0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0073400 | 6 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 25.00 |