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IPR038672

Source: InterPro

Description

IPR038672 is a Chromophore lyase CpcT/CpeT superfamily.

<p>This entry represents the CpcT/CpeT biliprotein lyase, which has been shown to covalently attach chromophores to cystiene residue(s) of phycobiliproteins [[cite:PUB00056794], [cite:PUB00056796]]. These proteins contain a conserved motif PYR in the amino terminal half of the protein that may be functionally important. In the chromatically adapting cyanobacterium Fremyella diplosiphon, the proteins have been shown to be induced by green light, as part of the cpeCDESTR operon [[cite:PUB00053876]].</p> <p>Structurally, CpcT forms a dimer and adopts a calyx-shaped β-barrel fold. Each CpcT subunit adopts a conical, goblet-shaped β-barrel with 10 anti-parallel β-strands; this fold is characteristic for the FABP subfamily of the calycin superfamily.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0332000.1
– Chromophore lyase CpcT/CpeT; TAIR: AT5G51020.1 crumpled leaf; Swiss-Prot: sp|Q9FI46|CRL_ARATH Chromophore lyase CRL, chloroplastic; TrEMBL-Plants: tr|I3SDK0|I3SDK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332000
Domains
11
LotjaGi1g1v0332000.2
– Chromophore lyase CpcT/CpeT; TAIR: AT5G51020.1 crumpled leaf; Swiss-Prot: sp|Q9FI46|CRL_ARATH Chromophore lyase CRL, chloroplastic; TrEMBL-Plants: tr|I3SDK0|I3SDK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332000
Domains
11
LotjaGi1g1v0332000.3
– Chromophore lyase CpcT/CpeT; TAIR: AT5G51020.1 crumpled leaf; Swiss-Prot: sp|Q9FI46|CRL_ARATH Chromophore lyase CRL, chloroplastic; TrEMBL-Plants: tr|I3SDK0|I3SDK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332000
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd16338 CDD 1 33.33