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cd16338

Source: CDD

Description

CpcT

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016829
Molecular function Lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
Subterm of
GO:0017009
Biological process Protein-phycocyanobilin linkage The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin.
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0332000.1
– Chromophore lyase CpcT/CpeT; TAIR: AT5G51020.1 crumpled leaf; Swiss-Prot: sp|Q9FI46|CRL_ARATH Chromophore lyase CRL, chloroplastic; TrEMBL-Plants: tr|I3SDK0|I3SDK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332000
Domains
11
LotjaGi1g1v0332000.2
– Chromophore lyase CpcT/CpeT; TAIR: AT5G51020.1 crumpled leaf; Swiss-Prot: sp|Q9FI46|CRL_ARATH Chromophore lyase CRL, chloroplastic; TrEMBL-Plants: tr|I3SDK0|I3SDK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332000
Domains
11
LotjaGi1g1v0332000.3
– Chromophore lyase CpcT/CpeT; TAIR: AT5G51020.1 crumpled leaf; Swiss-Prot: sp|Q9FI46|CRL_ARATH Chromophore lyase CRL, chloroplastic; TrEMBL-Plants: tr|I3SDK0|I3SDK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332000
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd16338 CDD 1 33.33