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IPR039109

Source: InterPro

Description

IPR039109 is a Large ribosomal subunit protein eL30-like.

<p>This entry includes proteins with a structural fold similar to ribosomal protein eL30 [[cite:PUB00059556]], and includes eL30 from archaean 50S ribosomes, eL30 from eukaryotic 60S ribosomes and some uncharacterised bacterial sequences.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0525700.1
– 60S ribosomal protein L30; TAIR: AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|O49884|RL30_LUPLU 60S ribosomal protein L30; TrEMBL-Plants: tr|I3S9Q1|I3S9Q1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0525700
Domains
13
LotjaGi2g1v0053800.1
– 60S ribosomal protein L30; TAIR: AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|O49884|RL30_LUPLU 60S ribosomal protein L30; TrEMBL-Plants: tr|A0A0B2PLT2|A0A0B2PLT2_GLYSO 60S ribosomal protein L30; Found in the gene: LotjaGi2g1v0053800
Domains
13
LotjaGi4g1v0389100.1
– 60S ribosomal protein L30; TAIR: AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|O49884|RL30_LUPLU 60S ribosomal protein L30; TrEMBL-Plants: tr|A0A0B2PLT2|A0A0B2PLT2_GLYSO 60S ribosomal protein L30; Found in the gene: LotjaGi4g1v0389100
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF55315 SUPERFAMILY 1 33.33