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IPR039241

Source: InterPro

Description

IPR039241 is a Ribosomal RNA-processing protein Rrp9-like.

<p>This entry includes Rrp9 from budding yeasts and its homologue, U3 small nucleolar RNA-interacting protein 2 (also known as U3-55K) from animals. Rrp9 interacts with U3 snRNP and is involved in pre-rRNA processing [[cite:PUB00089348]]. Human U3-55 protein has also been shown to bind to U3 snoRNA [[cite:PUB00089347], [cite:PUB00089346]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006364
Biological process RRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
Subterm of
Part of
GO:0034511
Molecular function U3 snoRNA binding Interacting selectively and non-covalently with U3 small nucleolar RNA.
Subterm of

Associated Lotus transcripts 1

Transcript Name Description Predicted domains Domain count
LotjaGi6g1v0272500.1
– Transducin family protein / WD-40 repeat family protein; TAIR: AT4G05410.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9M0V4|YAO_ARATH U3 snoRNP-associated protein-like YAO; TrEMBL-Plants: tr|A0A0L9VDN2|A0A0L9VDN2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0272500
Domains
18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 100.00