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IPR039907 is a RNA-binding protein NOB1.
<p>RNA-binding protein NOB1 has a nuclear location [[cite:PUB00078774]] and contains a PIN domain and binds a single zinc ion. Budding yeast Nob1 is involved in proteasomal and 40S ribosomal subunit biogenesis [[cite:PUB00073513]]. It is also required for maturation of the small subunit ribosomal RNA by catalyzing cleavage at site D after export of the preribosomal subunit into the cytoplasm. Nob1 is also found in archaea, where it is manganese-dependent and also processes RNA-substrates [[cite:PUB00059642]]. This entry also includes VapC1 and VapC3. VapC1 is a toxic component and a ribonuclease of a toxin-antitoxin (TA) module [[cite:PUB00078758]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RNA-binding protein NOB1; TAIR: AT5G41190.1 RNA-binding NOB1-like protein; Swiss-Prot: sp|Q3T042|NOB1_BOVIN RNA-binding protein NOB1; TrEMBL-Plants: tr|G7LI13|G7LI13_MEDTR RNA-binding protein NOB1; Found in the gene: LotjaGi4g1v0424700 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 100.00 |