Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR040132 is a TREX component Tex1/THOC3.
<p>This entry includes Tex1 from budding yeasts and THOC3 from animals and plants. Tex1/THOC is part of the TREX complex involved in mRNA export. TREX complex is thought to couple mRNA transcription, processing and nuclear export. It specifically associates with spliced mRNA and not with unspliced pre-mRNA [[cite:PUB00090563], [cite:PUB00090564]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA export from nucleus | The directed movement of mRNA from the nucleus to the cytoplasm. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | WD-repeat protein, putative; TAIR: AT5G56130.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9FKT5|THOC3_ARATH THO complex subunit 3; TrEMBL-Plants: tr|A0A059BRQ3|A0A059BRQ3_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0136100 | 18 | ||
| – | Transducin/WD-like repeat-protein; TAIR: AT5G56130.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9FKT5|THOC3_ARATH THO complex subunit 3; TrEMBL-Plants: tr|V7BL70|V7BL70_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0136100 | 19 | ||
| – | Transducin/WD-like repeat-protein; TAIR: AT5G56130.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9FKT5|THOC3_ARATH THO complex subunit 3; TrEMBL-Plants: tr|V7BL70|V7BL70_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0136100 | 19 | ||
| – | Transducin/WD-like repeat-protein; TAIR: AT5G56130.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9FKT5|THOC3_ARATH THO complex subunit 3; TrEMBL-Plants: tr|V7BL70|V7BL70_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0136100 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF50978 | SUPERFAMILY | 1 | 25.00 |