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IPR040773

Source: InterPro

Description

IPR040773 is a 26S proteasome regulatory subunit Rpn6, N-terminal.

<p>This is the N-terminal domain found in Rpn6 proteins (26S proteasome regulatory subunit). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the centre capped at the top and bottom by 19-subunit regulatory particles (RPs). The CP forms the catalytic chamber and the RP is formed from two subcomplexes known as the lid and the base [[cite:PUB00091255]]. The lid comprises nine Rpn subunits in yeast (Rpn3/5/6/7/8/9/11/12/15) and the base comprises three Rpn subunits (Rpn1/2/13) and six ATPases (Rpt1-6) [[cite:PUB00091256]]. Phosphorylation of Rpn6 enhances proteasome ATPase activity and promotes the formation of doubly capped (30S) proteasome, hence accelerating the degradation of short-lived proteins [[cite:PUB00091257]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 10

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0397800.1
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800
Domains
16
LotjaGi1g1v0397800.2
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800
Domains
16
LotjaGi1g1v0397800.3
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800
Domains
16
LotjaGi1g1v0397800.4
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800
Domains
16
LotjaGi1g1v0397800.5
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800
Domains
16
LotjaGi1g1v0397800.6
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800
Domains
16
LotjaGi1g1v0485700.1
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700
Domains
16
LotjaGi1g1v0485700.2
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700
Domains
16
LotjaGi1g1v0485700.3
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700
Domains
16
LotjaGi1g1v0485700.4
– 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF48452 SUPERFAMILY 1 10.00