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IPR040870 is a HEN1, double-stranded RNA binding domain 2.
<p>This domain is found in HEN1 proteins from Arabidopsis. Structural characterization revealed that small RNA substrate binds to two double-stranded RNA (dsRNA)-specific binding domains, dsRBD1 and dsRBD2. This entry relates to dsRBD2 which together with dsRBD1 forms a strong grip on the duplex region of the small RNA substrate, and these interactions help position the other duplex terminus towards the MTase domain ([interpro:IPR025714]) [[cite:PUB00091278]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Small RNA 2'-O-methyltransferase; TAIR: AT4G20910.1 double-stranded RNA binding protein-related / DsRBD protein-like protein; Swiss-Prot: sp|Q9C5Q8|HEN1_ARATH Small RNA 2'-O-methyltransferase; TrEMBL-Plants: tr|I1K2Z2|I1K2Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0026400 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF54768 | SUPERFAMILY | 1 | 100.00 |