Domain Predictions — View

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MF_00163

Source: Hamap

Description

Peptide deformylase [def].

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3642120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peptide deformylase 1B, chloroplastic-like [Cicer arietinum] gi\|502100482\|ref\|XP_004491728.1\|	Domains Coil G3DSA:3.90.45.10 IPR023635 MF_00163 PF01327 PR01576 PTHR10458 PTHR10458:SF2 SSF56420 TIGR00079 cd00487	11
Lj3g3v0075590.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peptide deformylase 1A, chloroplastic-like [Cicer arietinum] gi\|502080811\|ref\|XP_004486685.1\|	Domains G3DSA:3.90.45.10 IPR023635 MF_00163 NON_CYTOPLASMIC_DOMAIN PF01327 PR01576 PTHR10458 PTHR10458:SF11 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56420 SignalP-TM_GRAM_POSITIVE SignalP-noTM_GRAM_NEGATIVE cd00487 mobidb-lite	17
Lj3g3v2213520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max] gi\|356526200\|ref\|XP_003531707.1\|	Domains G3DSA:3.90.45.10 IPR023635 MF_00163 PF01327 PR01576 PTHR10458 PTHR10458:SF11 SSF56420 TIGR00079 cd00487	10
LotjaGi1g1v0608600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptide deformylase; TAIR: AT5G14660.1 peptide deformylase 1B; Swiss-Prot: sp\|Q9FUZ2\|DEF1B_ARATH Peptide deformylase 1B, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A0B2QCD6\|A0A0B2QCD6_GLYSO Peptide deformylase; Found in the gene: LotjaGi1g1v0608600	Domains Coil G3DSA:3.90.45.10 IPR023635 IPR036821 MF_00163 PF01327 PR01576 PTHR10458 PTHR10458:SF2 SSF56420 TIGR00079 cd00487	12
LotjaGi3g1v0011000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptide deformylase; TAIR: AT1G15390.1 peptide deformylase 1A; Swiss-Prot: sp\|Q9FUZ0\|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic; TrEMBL-Plants: tr\|Q2HVV7\|Q2HVV7_MEDTR Peptide deformylase; Found in the gene: LotjaGi3g1v0011000	Domains G3DSA:3.90.45.10 IPR023635 IPR036821 MF_00163 NON_CYTOPLASMIC_DOMAIN PF01327 PR01576 PTHR10458 PTHR10458:SF11 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56420 SignalP-TM SignalP-noTM cd00487 mobidb-lite	18
LotjaGi3g1v0358400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptide deformylase; TAIR: AT1G15390.1 peptide deformylase 1A; Swiss-Prot: sp\|Q9FUZ0\|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic; TrEMBL-Plants: tr\|V7AU53\|V7AU53_PHAVU Peptide deformylase; Found in the gene: LotjaGi3g1v0358400	Domains G3DSA:3.90.45.10 IPR023635 IPR036821 MF_00163 PF01327 PR01576 PTHR10458 PTHR10458:SF11 SSF56420 TIGR00079 cd00487	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00487	CDD	1	16.67