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PD007478

Source: ProDom

Description

ZINC TRANSCRIPTION FINGER DOF DNA-BINDING ZINC-FINGER METAL-BINDING NUCLEAR REGULATION BINDING

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Associated Lotus transcripts 31

Transcript Name Description Predicted domains Domain count
Lj0g3v0106459.1
– PREDICTED: dof zinc finger protein DOF3.5-like [Glycine max] gi|356498677|ref|XP_003518176.1|
Domains
8
Lj0g3v0233949.1
– PREDICTED: dof zinc finger protein DOF1.7-like [Glycine max] gi|356522204|ref|XP_003529737.1|
Domains
8
Lj0g3v0246749.1
– Dof-type zinc finger DNA-binding family protein [Theobroma cacao] gi|508699996|gb|EOX91892.1|
Domains
8
Lj0g3v0252679.1
– F-box family protein [Populus trichocarpa] gi|224081545|ref|XP_002306453.1|
Domains
7
Lj0g3v0281979.1
– Dof zinc finger protein [Medicago truncatula] gi|357469373|ref|XP_003604971.1|
Domains
5
Lj0g3v0291209.1
– Dof zinc finger protein [Medicago truncatula] gi|357469373|ref|XP_003604971.1|
Domains
8
Lj0g3v0292619.1
– PREDICTED: cyclic dof factor 4-like [Cicer arietinum] gi|502078275|ref|XP_004485893.1|
Domains
8
Lj0g3v0331729.1
– PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max] gi|356541242|ref|XP_003539088.1|
Domains
8
Lj0g3v0335699.1
– PREDICTED: dof zinc finger protein DOF5.3-like [Glycine max] gi|356555121|ref|XP_003545886.1|
Domains
8
Lj0g3v0363619.1
– Dof21 [Glycine max] gi|351723723|ref|NP_001236777.1|
Domains
8
Lj0g3v0363619.2
– Dof21 [Glycine max] gi|351723723|ref|NP_001236777.1|
Domains
8
Lj1g3v0409040.1
– PREDICTED: dof zinc finger protein DOF5.6 [Glycine max] gi|356508677|ref|XP_003523081.1|
Domains
8
Lj1g3v0513130.1
– PREDICTED: dof zinc finger protein DOF3.3-like [Glycine max] gi|356516810|ref|XP_003527086.1|
Domains
8
Lj1g3v0579530.1
– PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera] gi|225455716|ref|XP_002267092.1|
Domains
8
Lj1g3v2975990.1
– PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max] gi|356567050|ref|XP_003551736.1|
Domains
8
Lj1g3v3220250.1
– PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max] gi|356502430|ref|XP_003520022.1|
Domains
8
Lj1g3v3991510.1
– PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max] gi|356571789|ref|XP_003554055.1|
Domains
8
Lj2g3v1277700.1
– PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max] gi|356502549|ref|XP_003520081.1|
Domains
8
Lj3g3v0290550.1
– PREDICTED: dof zinc finger protein DOF1.7-like [Glycine max] gi|356556684|ref|XP_003546653.1|
Domains
8
Lj3g3v2310050.1
– PREDICTED: dof zinc finger protein DOF2.1-like [Glycine max] gi|356542565|ref|XP_003539737.1|
Domains
8
Lj3g3v2477690.1
– Dof17 [Glycine max] gi|351722092|ref|NP_001236720.1|
Domains
8
Lj3g3v3189700.1
– PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max] gi|356542453|ref|XP_003539681.1|
Domains
8
Lj4g3v0190020.1
– Dof21 protein [Sorghum bicolor] gi|496205487|gb|AGL40024.1|
Domains
7
Lj4g3v0450470.1
– Dof6 transcription factor [Glycine max] gi|351726449|ref|NP_001236615.1|
Domains
8
Lj4g3v0462790.1
– PREDICTED: dof zinc finger protein DOF1.4-like [Cicer arietinum] gi|502142702|ref|XP_004505077.1|
Domains
8
Lj4g3v0462790.2
– PREDICTED: dof zinc finger protein DOF1.4-like [Cicer arietinum] gi|502142702|ref|XP_004505077.1|
Domains
8
Lj4g3v1635580.1
– PREDICTED: dof zinc finger protein DOF3.3 [Glycine max] gi|356562852|ref|XP_003549682.1|
Domains
8
Lj4g3v1736210.1
– PREDICTED: dof zinc finger protein DOF5.4-like [Glycine max] gi|356511564|ref|XP_003524495.1|
Domains
8
Lj4g3v2604580.1
– PREDICTED: cyclic dof factor 4-like [Fragaria vesca subsp]. vesca] gi|470115510|ref|XP_004293942.1|
Domains
7
Lj5g3v1236780.1
– Transcription factor C2C2-Dof [Lotus japonicus] gi|193237589|dbj|BAG50071.1|
Domains
8
Lj6g3v2017500.1
– PREDICTED: dof zinc finger protein DOF2.2-like [Cicer arietinum] gi|502077975|ref|XP_004485800.1|
Domains
7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.23