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Catalytic LigB subunit of aromatic ring-opening dioxygenase
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular aromatic compound metabolic process | The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells. | ||
| Molecular function | Ferrous iron binding | Interacting selectively and non-covalently with ferrous iron, Fe(II). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein-like [Glycine max] gi|356559959|ref|XP_003548263.1| | 9 | ||
| – | 11 | |||
| – | PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein-like [Glycine max] gi|356559959|ref|XP_003548263.1| | 9 | ||
| – | PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein-like [Glycine max] gi|356559963|ref|XP_003548265.1| | 9 | ||
| – | 4,5-dioxygenase-like protein; TAIR: AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family; Swiss-Prot: sp|Q70FG7|DODA_BETVU 4,5-DOPA dioxygenase extradiol; TrEMBL-Plants: tr|I3SYT8|I3SYT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0166200 | 9 | ||
| – | 4,5-dioxygenase-like protein; TAIR: AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family; Swiss-Prot: sp|Q70FG7|DODA_BETVU 4,5-DOPA dioxygenase extradiol; TrEMBL-Plants: tr|I3SFC8|I3SFC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0166400 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd07363 | CDD | 1 | 16.67 |