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PF05562

Description

Cold acclimation protein WCOR413

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] gi|449455212|ref|XP_004145347.1| 8
PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cicer arietinum] gi|502153056|ref|XP_004509200.1| 9
PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like isoform X2 [Cicer arietinum] gi|502140498|ref|XP_004504237.1| 8
Cold acclimation protein; TAIR: AT3G50830.1 cold-regulated 413-plasma membrane 2; Swiss-Prot: sp|Q9SVL6|CRPM2_ARATH Cold-regulated 413 plasma membrane protein 2; TrEMBL-Plants: tr|I3SSB3|I3SSB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0503700 8
Cold acclimation protein; TAIR: AT3G50830.1 cold-regulated 413-plasma membrane 2; Swiss-Prot: sp|Q9SVL6|CRPM2_ARATH Cold-regulated 413 plasma membrane protein 2; TrEMBL-Plants: tr|I1MNK1|I1MNK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0111800 8
Cold acclimation protein; TAIR: AT1G29390.1 cold regulated 314 thylakoid membrane 2; Swiss-Prot: sp|F4I1G5|CRIM2_ARATH Cold-regulated 413 inner membrane protein 2, chloroplastic; TrEMBL-Plants: tr|I3SSQ8|I3SSQ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0383800 8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 16.67