Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF06273

Source: Pfam

Description

Plant specific eukaryotic initiation factor 4B

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003743
Molecular function Translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
Subterm of

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
Lj0g3v0242879.1
– PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1|
Domains
6
Lj0g3v0242879.2
– PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1|
Domains
6
Lj4g3v2730310.1
– PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1|
Domains
4
Lj4g3v2730340.1
– PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1|
Domains
6
LotjaGi3g1v0524200.1
– Translation initiation factor; TAIR: AT4G38710.2 glycine-rich protein; Swiss-Prot: sp|Q9SZP8|IF4B3_ARATH Eukaryotic translation initiation factor 4B3; TrEMBL-Plants: tr|A0A1J7H7M2|A0A1J7H7M2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524200
Domains
6
LotjaGi3g1v0524200.2
– Eukaryotic translation initiation factor-like protein; TAIR: AT4G38710.2 glycine-rich protein; Swiss-Prot: sp|Q9SZP8|IF4B3_ARATH Eukaryotic translation initiation factor 4B3; TrEMBL-Plants: tr|A0A0S3SE05|A0A0S3SE05_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524200
Domains
5
LotjaGi4g1v0392900.1
– Eukaryotic translation initiation factor-like protein; TAIR: AT3G26400.1 eukaryotic translation initiation factor 4B1; Swiss-Prot: sp|Q9LIN5|IF4B1_ARATH Eukaryotic translation initiation factor 4B1; TrEMBL-Plants: tr|A0A0S3QYR9|A0A0S3QYR9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392900
Domains
6
LotjaGi4g1v0392900.2
– Eukaryotic translation initiation factor-like protein; TAIR: AT3G26400.1 eukaryotic translation initiation factor 4B1; Swiss-Prot: sp|Q9LIN5|IF4B1_ARATH Eukaryotic translation initiation factor 4B1; TrEMBL-Plants: tr|I1KSX1|I1KSX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392900
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 12.50