Domain Predictions — View

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PF12862

Source: Pfam

Description

Anaphase-promoting complex subunit 5

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4752840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit 5-like [Glycine max] gi\|356553615\|ref\|XP_003545150.1\|	Domains CYTOPLASMIC_DOMAIN IPR026000 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 PTHR12830:SF9 TRANSMEMBRANE mobidb-lite	8
Lj1g3v4752840.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit 5-like [Glycine max] gi\|356553615\|ref\|XP_003545150.1\|	Domains CYTOPLASMIC_DOMAIN IPR026000 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 PTHR12830:SF9 TRANSMEMBRANE mobidb-lite	8
Lj2g3v3084350.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit 5-like [Glycine max] gi\|356553615\|ref\|XP_003545150.1\|	Domains IPR026000 PF12862 PTHR12830 PTHR12830:SF9	4
LotjaGi1g1v0044200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|V7B6H8\|V7B6H8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0044200	Domains IPR026000 IPR037679 PF12862 PTHR12830 PTHR12830:SF9 cd16270	6
LotjaGi1g1v0044200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|A0A0B2PRE7\|A0A0B2PRE7_GLYSO Anaphase-promoting complex subunit 5; Found in the gene: LotjaGi1g1v0044200	Domains IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 PTHR12830:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix	11
LotjaGi1g1v0044200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|A0A0B2PRE7\|A0A0B2PRE7_GLYSO Anaphase-promoting complex subunit 5; Found in the gene: LotjaGi1g1v0044200	Domains IPR011990 IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 PTHR12830:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48452 TMhelix	13
LotjaGi1g1v0738900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|A0A151QXF2\|A0A151QXF2_CAJCA Anaphase-promoting complex subunit 5; Found in the gene: LotjaGi1g1v0738900	Domains CYTOPLASMIC_DOMAIN IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 TRANSMEMBRANE cd16270 mobidb-lite	9
LotjaGi1g1v0738900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|A0A151QXF2\|A0A151QXF2_CAJCA Anaphase-promoting complex subunit 5; Found in the gene: LotjaGi1g1v0738900	Domains CYTOPLASMIC_DOMAIN IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 TRANSMEMBRANE cd16270 mobidb-lite	9
LotjaGi1g1v0738900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|V7B6H8\|V7B6H8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0738900	Domains CYTOPLASMIC_DOMAIN IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 TRANSMEMBRANE cd16270 mobidb-lite	9
LotjaGi1g1v0738900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|A0A0B2PRE7\|A0A0B2PRE7_GLYSO Anaphase-promoting complex subunit 5; Found in the gene: LotjaGi1g1v0738900	Domains CYTOPLASMIC_DOMAIN IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	10
LotjaGi1g1v0738900.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|V7B6H8\|V7B6H8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0738900	Domains CYTOPLASMIC_DOMAIN IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	10
LotjaGi1g1v0738900.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp\|Q8H1U4\|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr\|A0A0B2PRE7\|A0A0B2PRE7_GLYSO Anaphase-promoting complex subunit 5; Found in the gene: LotjaGi1g1v0738900	Domains CYTOPLASMIC_DOMAIN IPR026000 IPR037679 NON_CYTOPLASMIC_DOMAIN PF12862 PTHR12830 SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	8.33