Domain Predictions — View

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PR00744

Source: PRINTS

Description

Glycosyl hydrolase family 37 signature

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004555 View details of GO:0004555 AmiGO InterPro QuickGO	Molecular function	Alpha,alpha-trehalase activity	Catalysis of the reaction: alpha,alpha-trehalose + H2O = 2 D-glucose.	Subterm of GO:0015927
GO:0005991 View details of GO:0005991 AmiGO InterPro QuickGO	Biological process	Trehalose metabolic process	The chemical reactions and pathways involving trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.	Subterm of GO:0005984

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v3014510.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: trehalase-like isoform X1 [Cicer arietinum] gi\|502138911\|ref\|XP_004503574.1\|	Domains IPR001661 IPR008928 IPR018232 PF01204 PR00744 PS00928 PTHR23403 PTHR23403:SF1 SSF48208	9
Lj4g3v3014510.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: trehalase-like isoform X1 [Cicer arietinum] gi\|502138911\|ref\|XP_004503574.1\|	Domains IPR001661 IPR008928 IPR018232 NON_CYTOPLASMIC_DOMAIN PF01204 PR00744 PS00928 PTHR23403 PTHR23403:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48208 SignalP-TM_EUK SignalP-TM_GRAM_POSITIVE SignalP-noTM_GRAM_NEGATIVE TMhelix	18
LotjaGi4g1v0438200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Trehalase; TAIR: AT4G24040.1 trehalase 1; Swiss-Prot: sp\|Q9SU50\|TRE1_ARATH Trehalase; TrEMBL-Plants: tr\|I1K665\|I1K665_SOYBN Trehalase; Found in the gene: LotjaGi4g1v0438200	Domains G3DSA:1.50.10.10 IPR001661 IPR008928 IPR012341 NON_CYTOPLASMIC_DOMAIN PF01204 PR00744 PTHR23403 PTHR23403:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48208 SignalP-TM SignalP-noTM TMhelix	17
LotjaGi4g1v0438200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Trehalase; TAIR: AT4G24040.1 trehalase 1; Swiss-Prot: sp\|Q9FWC1\|TRE_ORYSJ Probable trehalase; TrEMBL-Plants: tr\|I1K665\|I1K665_SOYBN Trehalase; Found in the gene: LotjaGi4g1v0438200	Domains G3DSA:1.50.10.10 IPR001661 IPR008928 IPR012341 IPR018232 PF01204 PR00744 PS00928 PTHR23403 PTHR23403:SF1 SSF48208	11
LotjaGi4g1v0438200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Trehalase; TAIR: AT4G24040.1 trehalase 1; Swiss-Prot: sp\|Q9FWC1\|TRE_ORYSJ Probable trehalase; TrEMBL-Plants: tr\|I1K665\|I1K665_SOYBN Trehalase; Found in the gene: LotjaGi4g1v0438200	Domains G3DSA:1.50.10.10 IPR001661 IPR008928 IPR012341 IPR018232 NON_CYTOPLASMIC_DOMAIN PF01204 PR00744 PS00928 PTHR23403 PTHR23403:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48208 SignalP-TM SignalP-noTM TMhelix	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TMhelix	TMHMM	1	20.00