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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0438200 |
| Transcript ID | LotjaGi4g1v0438200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalase; TAIR: AT4G24040.1 trehalase 1; Swiss-Prot: sp|Q9FWC1|TRE_ORYSJ Probable trehalase; TrEMBL-Plants: tr|I1K665|I1K665_SOYBN Trehalase; Found in the gene: LotjaGi4g1v0438200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81130936..81136627) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGAAACAGAAAAGGAAGAAAAATGTAATAAATCTTATACATTATATGAAAAGAATCAATTTCAGTAATGAATCTCAT TGTGCAGACTGATAGTGCCTTCCAGGTCCATGAATAGAATCAATTTAAAAATTCGGTAGCGTGTTTGGTTCGACAGAAAG AATTGTTAGCACCAATGAATCCAAACACGTTACCAAAAGCCATTTGATTTGAAGCAATGTTGTAGTATTTATAGACGGCA CCTTCTCTGTTCGAAACCTCAATTGTCACGAAAATCCAAAACTCAGGTCAACACTGCCGGCAACTTGATTCCATTTGCTT TGTTTTCTTCTTCTTCTTCATCTTGTTTTCAGTTACTTTTCTGTTATTTCGGTTCTGCAAATCACAATGGCACTCCACAC ACGCAAACTGCACCTCCTTCTAACATGTCTATTTCTGTTCTTCTCACCACTAACACCACTCACCACCGTTACAGCCATGG TTGCCGCTGCTGTTCTTCCCGTCAAGCCTTCAACCCCTCTCGTTTCCTTCCTCGAACGCCTCCAACACACCGCCTTCGAA TCCTTCGCCGGCGGCGGCGACAACGACGGCGAACCTTCCCACTTCGACCCGAAGACTTACGTCGATTTGCCTCTCAAGTT CAGCCTCGCTGTCACCGATGACGCGTTCCAGAACCTTCCACGGGCGGCGAATGGGTCAATCCCGGCCCGTGAGTTGAAGA GTTTTCTAGAAGGCTATTTTGAGGATGCAGGGGATGATCTGGTGCACGTTGATCCAGAGGATTTTGTTCCTGAGCCTGAG GGTTTCTTGCCGAAGGTGAAGAACCTTGAGGTGAGAGCGTGGGCGATTCAGGTTCATTCGTTGTGGAAGAATCTGACCCG GAAGGTGTCTGGTTCGGTTGTGGCTGAACCGGAGTTGCATACTCTGCTTCCTCTGCCGGCTTCTGCTGTGGTTCCCGGTT CAAGGTTTCGTGAGGTTTATTACTGGGATTCCTATTGGGTGATCAGGTTCGTATATTCGTGCATGCTTTCTCTGCTTCAT TGCTTTTTCTGTTTTTTTTTTTTTTGGTGAATGGTGATGATGATGATGTTGTTTTGCTCTGTTTTTTATTGGAGATTTCA GGGGTTTGTTGGTGAGTAAAATGTACAAGACTGCTACTGATATTGTCATGAATCTCATTCACATGATAGAGGAATATGGG TTCGTGCTTAATGGTGCTAGAGCTTACTACACTAACAGGAGGTACTACTACTAGTACTACCCTCTTCTTTTCCATTTTTT CACAGCAATGCTATTTTGAATTTCATTTTGTCTTTTTGTTGTTGGTTCCCCTCATTTTGTTGTAATGTTTGGTGTACATC CAATTGCCTTAGACACACAATGAGATGATATAGGATGAGAAGAAAGATAAATGATACATGTAATATACACAGTAATATAA AGAGAAAGATAGGGAGAAAAATGTAATATTTGAAATGTATGTTAGTCTAAGTGATTCGTGACTTGGAACAATTTTGTTGT GATGGGAAACTTCGAATAAATGAATTATGTTTGGTTCACAGATGAAATCCACCTCTACCTTGTGGATGAAGAAGAAACAA GAGAGAAATAAAAGATATGATCATATAATATAATAGATGATATGATAGGAATAGAAAAGAGAAAATAAAAAGGAGAAATA TTTAAAAATAAGATGAAAGATAAATATAAGTGTGAATGAATCAATATTCTCTGTTTGTTTGTCTTTTGTATACAACCTAA ATGAATGTCTAGTAACCATTATTGTATTATTGTACTTTCACTTGCTAGTCAAAGTCTTAGTTTGATTTTGTGTGTGTGTG TGTGTGCACATGCTTATGATGTGTCCAGTACTCCAGTGTTTGAAGATGTATATCCTTTCCTTAAAGTATATGCTGATCCT TTCGTGTACTTAAAAAACAATTGCTTTTTTTGTTTCGGGGTTTATAATTTATCTACTGATCTTTAGGCTTCGAATAATTG AGCAATAAGTTTCAAAAGATAATTTTCATGGCATAATTTTGACTATAGTTGTTTTATCCTAATATATTTCATCCTCATCT GCACAGCACCTTTTGAAATTCAAAGAAATTATTGCCATAATTCTTGCTCTTACAAACAGAAAAGGTGACAATAAGTTTAA CTATGATTTTACAGCCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACTGTAGCACTGGCAACATAGAATTAGT CAAAAGGTCTCTCCCTGCGCTACTGAAAGAGCATGAGTTTTGGAATTCAGGTATTACACCAAAGTTTTTGCCTAATTGTT GGATGATACTTGAATATGCATACCTTTTAGGTTTTCCAAGTTAATGGTTTTAGCTTTTATTTGATCTTGTAGATATACAT AAAGTGACCATTTTGGATGCTCAAGGTTGCACTCACAACCTAAATCGTTATAATGCAATGTGGAACAAACCCAGGCCAGA ATCATCCATACAAGTGAGTGTGTGCTCTGGTAAATACTGTGGTGGTAATTAGGGAAATGACATTTGACTATAACATTGGG TAATTCCATGACACAGGACAAGACATCTGCTTCCAAGTTCTCAAAAATTTCAGAAAAACAACATTTTTACCGTCAACTGG CATCAGCTGCTGAATCAGGATGGGACTTCAGCACAAGATGGATGAGGTACTAATTTATTAACTACAATTTTTTTCTACCC GAAACAGATAAAGAAAAGGAAATAATCTGAATTTCTTCTTACTTCTTAGGCACTGAAAATGCAGTTGTGGCAAATATTTG TTTTTAATAGGCTCCCTAACCTAAGCAAGTTGCTTTCAATCAAATGCTCACCTTTCTCAATAGAACACACTTCAGCTAAT TCTAACACTATGCTGCGTTTAATTAGTAACAGTTTGTATGCAAACCAAAAAGTACTTGTTGGAGCTTCTTTAGTGCATTT TCTAGTTGATAAACTCCAATAATATGTCTCCAAAATAAGTGTGTATCCAAACGGGCACTTAGTCAACAATACTTGCAATT TCATTGAAATCCTATCATGTTTTGATGCAGAGATCCTCCTGATTTCACAACATTGTCTACAACATCAGTAATACCTGTTG ATTTAAATGCATTTCTACTTGGGGTATGTATTAGACCAATGACTAAAAGAAGCCCTGTGATCAGTGTCTGTAGCTTGATT TAATTCTGTGATGCCTTTTGATTCAGATGGAGCATAATATTGCTTTCTTTGCAAAAGTTACTGGAGATAATAGTACTGCT GAACACTTTCTGCAAATTTCTGATCTTAGAAAGAAGTCAATGAACTCTGTTTTCTGGAACTCAAACATGACTCAATGGCT TGATTACTGGCTCAGTGATAGCACATCTGAGGTATTTTCAAGTGCTACTTGTATAAATTTATCATATGGAAAACTATATT AGCCTTATGCAGTTTTTCTGACTGTCTCTTTGATACTTCTAGGAGATTCAAGTTTTGAAAACCACGCAGCAGAATGAAAA TGCATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGGTATTCTTAATTGATGTGGATACAAATATC AAGTATGTGAGTGATTGTTTCTTTATTTAATGAGCAATACCTTTCTCTCTGATTTTTTAAAAAGATTTCCCTGTGTTTTA AGTTGATAGTTAATATGGTTTGAATTTGAAGATTCTTCACTTGTGGGTAGTGTTGTTGAAAGTCTCAAAACTTCTGGCCT GCTTTGTGCTGCTGGAATTGCAACTTCCTTGAGTGATTCAGGACAACAGTGGTAAGTTACAAGTACATTCGTATTGGTGG AAAATGGGAAAGGGTAGGTAGTTTGGGAGGGAGAAGAAATAAAACATTTTACTTAGTGCATAATTGTAAACGTTTCTGCA ACGTATAATGAAGTCATAATCAACTCTAGGCAAAAGCTTATGTGAGTCTGGGACTCAGAATTGATTTTATTGAAAAAGAA GTTGATCCAAACATGCTAATCAGCCTTTGTTTATAGGGACTTTCCAAATGGTTGGGCACCACTTCAACACATGCTAGTTG AAGGTCTGCTAAAATCAGGGTTGGAAGAAGCAAGGACATTGGCAGAGGAAATTGCCATCAGATGGATCAAAACGAATTAT ATTGTTTACAAGAAAACAGGTGTAATGCATGAAAAGTTTAACGTGGAGCATTGCGGAGAATTTGGAGGTGGAGGTGAATA CATACCCCAGGTATGACTATACCCCCATATCATGGTTTTAGGCTTTTAGGGTAATATTTGAGAAACATATAATGTGATTT GTGGTGAGGGGAAGAAATTTGCATGGTATATTTTCAATAGATTTGTGATTAGTCTTCTTATATCAAATGATAAAATAAAA GCAAGTGATTCATGCTTGATTCACCTTAAGTAGAGTATCACGTTCGAGTCTGACAGTTTGTATTGGAATATTGCAGACTG GTTTTGGCTGGTCAAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGAAATATAGAATGCTGA TCGATGTACTCAGAAATTGAGTGTTTTTGGTGTTGCCGTTAGCTCCATCTGAAGGTTAATGGATTGGCTACATTCCTTTC ACGTTTTGTACATTGAAAAAGGGATTTGCCACTTCAATGGAGGAAAACGGAGCTCAGGCAGAAATCCCAACATACTCAAT CAATTTGCTTTGGTACAGATTGCTGCATATATCCCTTCCATCAAAGGCTACTATATAATTTTTTTGACGTAGACTATACT ATATTTACACCCAAAATCAAGACTTTACTATATATAATGGCATGAATTGGACCATTTTTTTTTCTTGGTCAAACGAATTG GACCATTTAATGTCAGTTGCTTTTATTTTGGGCCTATGATATTTCTTTTGGTCCTAAGGGTTCAAGATACAAGCTGCATT TTTGGAAAAGCCTGTGTTGGGCTTGATAATGTTTGGACAAAATACCACCGAGTGCGCGTAGAATTTCTAATGCAGTTCCT AATCAAACCCCGGAATTATTGGCTTCGTCTGATGTAATAAATCTGAACTGAAGAGTAATCCTTTGACAAAAAAAAAAACT AATTAACACTATTTTTTTTTTTTATAAAAAAGAATGCATTTGGACAAAAAATAATTCCCATGCATTCTAGGTATTTTTAC AAAATGTAGCAAAAAAAAAATGAAAAGTGAATTAAAATATTGTTAGCATAAAAAAACGCTAATACATTGTCTTGTTGTAT GTCATATAGTTGGAGATGTTAGGACTTAGGACCCAGGTGACATATTATAATCAATGGAAATATTTTTGTACTGTTGAGTT TCTTTTGTGCGATGACATACAGATTGAATATGCTGGAGTGGAATTGAATTCGTTGTTCTAAACCGTGACCCACCTAGATA CTCCACCATTCCTAAATATGAGACATATTACAAAAAATTACGCTTATTATGAAAACACTTAATGTAACTAATTAGTGTAT TGATTTTTTAAAAATGCATACATTATTTCTTATTTACCCTTTGTCATTTTCTCTCACTAATAATCATTGCATTTATTAAT GGTAGGTGGTAACTTTGGAATTGAAAACATACAATTAATGTGAGGGGTGAATATGAAAGAGTACAAAACCTTTTACTAGA TTATTGTAAAAG
CDS sequence (LotjaGi4g1v0438200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTCCACACACGCAAACTGCACCTCCTTCTAACATGTCTATTTCTGTTCTTCTCACCACTAACACCACTCACCAC CGTTACAGCCATGGTTGCCGCTGCTGTTCTTCCCGTCAAGCCTTCAACCCCTCTCGTTTCCTTCCTCGAACGCCTCCAAC ACACCGCCTTCGAATCCTTCGCCGGCGGCGGCGACAACGACGGCGAACCTTCCCACTTCGACCCGAAGACTTACGTCGAT TTGCCTCTCAAGTTCAGCCTCGCTGTCACCGATGACGCGTTCCAGAACCTTCCACGGGCGGCGAATGGGTCAATCCCGGC CCGTGAGTTGAAGAGTTTTCTAGAAGGCTATTTTGAGGATGCAGGGGATGATCTGGTGCACGTTGATCCAGAGGATTTTG TTCCTGAGCCTGAGGGTTTCTTGCCGAAGGTGAAGAACCTTGAGGTGAGAGCGTGGGCGATTCAGGTTCATTCGTTGTGG AAGAATCTGACCCGGAAGGTGTCTGGTTCGGTTGTGGCTGAACCGGAGTTGCATACTCTGCTTCCTCTGCCGGCTTCTGC TGTGGTTCCCGGTTCAAGGTTTCGTGAGGTTTATTACTGGGATTCCTATTGGGTGATCAGGGGTTTGTTGGTGAGTAAAA TGTACAAGACTGCTACTGATATTGTCATGAATCTCATTCACATGATAGAGGAATATGGGTTCGTGCTTAATGGTGCTAGA GCTTACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACTGTAGCACTGGCAACATAGA ATTAGTCAAAAGGTCTCTCCCTGCGCTACTGAAAGAGCATGAGTTTTGGAATTCAGATATACATAAAGTGACCATTTTGG ATGCTCAAGGTTGCACTCACAACCTAAATCGTTATAATGCAATGTGGAACAAACCCAGGCCAGAATCATCCATACAAGAC AAGACATCTGCTTCCAAGTTCTCAAAAATTTCAGAAAAACAACATTTTTACCGTCAACTGGCATCAGCTGCTGAATCAGG ATGGGACTTCAGCACAAGATGGATGAGAGATCCTCCTGATTTCACAACATTGTCTACAACATCAGTAATACCTGTTGATT TAAATGCATTTCTACTTGGGATGGAGCATAATATTGCTTTCTTTGCAAAAGTTACTGGAGATAATAGTACTGCTGAACAC TTTCTGCAAATTTCTGATCTTAGAAAGAAGTCAATGAACTCTGTTTTCTGGAACTCAAACATGACTCAATGGCTTGATTA CTGGCTCAGTGATAGCACATCTGAGGAGATTCAAGTTTTGAAAACCACGCAGCAGAATGAAAATGCATTTGCTTCCAATT TTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATTCTTCACTTGTGGGTAGTGTTGTTGAAAGTCTCAAAACTTCTGGC CTGCTTTGTGCTGCTGGAATTGCAACTTCCTTGAGTGATTCAGGACAACAGTGGGACTTTCCAAATGGTTGGGCACCACT TCAACACATGCTAGTTGAAGGTCTGCTAAAATCAGGGTTGGAAGAAGCAAGGACATTGGCAGAGGAAATTGCCATCAGAT GGATCAAAACGAATTATATTGTTTACAAGAAAACAGGTGTAATGCATGAAAAGTTTAACGTGGAGCATTGCGGAGAATTT GGAGGTGGAGGTGAATACATACCCCAGACTGGTTTTGGCTGGTCAAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGG ATGGCCTGAAGATCGAAATATAGAATGCTGA
Protein sequence (LotjaGi4g1v0438200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALHTRKLHLLLTCLFLFFSPLTPLTTVTAMVAAAVLPVKPSTPLVSFLERLQHTAFESFAGGGDNDGEPSHFDPKTYVD LPLKFSLAVTDDAFQNLPRAANGSIPARELKSFLEGYFEDAGDDLVHVDPEDFVPEPEGFLPKVKNLEVRAWAIQVHSLW KNLTRKVSGSVVAEPELHTLLPLPASAVVPGSRFREVYYWDSYWVIRGLLVSKMYKTATDIVMNLIHMIEEYGFVLNGAR AYYTNRSQPPLLSAMIYEIYCSTGNIELVKRSLPALLKEHEFWNSDIHKVTILDAQGCTHNLNRYNAMWNKPRPESSIQD KTSASKFSKISEKQHFYRQLASAAESGWDFSTRWMRDPPDFTTLSTTSVIPVDLNAFLLGMEHNIAFFAKVTGDNSTAEH FLQISDLRKKSMNSVFWNSNMTQWLDYWLSDSTSEEIQVLKTTQQNENAFASNFVPLWMKPFYSDSSLVGSVVESLKTSG LLCAAGIATSLSDSGQQWDFPNGWAPLQHMLVEGLLKSGLEEARTLAEEIAIRWIKTNYIVYKKTGVMHEKFNVEHCGEF GGGGEYIPQTGFGWSNGVVLAFLEEFGWPEDRNIEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 34 | 34 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 30 | 30 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 10 | 22 | 13 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 23 | 34 | 12 | - | – | |
| Phobius | 35 | 596 | 562 | - | – | |
| PANTHER | 46 | 596 | 551 | 3.2E-225 | ||
| PANTHER | 46 | 596 | 551 | 3.2E-225 | – | |
| Gene3D | 70 | 594 | 525 | 8.7E-169 | ||
| SUPERFAMILY | 71 | 589 | 519 | 6.73E-140 | ||
| Pfam | 73 | 587 | 515 | 4.2E-174 | ||
| PRINTS | 232 | 250 | 19 | 9.2E-42 | ||
| PRINTS | 302 | 319 | 18 | 9.2E-42 | ||
| PRINTS | 337 | 354 | 18 | 9.2E-42 | ||
| PRINTS | 369 | 386 | 18 | 9.2E-42 | ||
| PRINTS | 412 | 428 | 17 | 9.2E-42 | ||
| PRINTS | 490 | 506 | 17 | 9.2E-42 | ||
| ProSitePatterns | 497 | 506 | 10 | - | ||
| PRINTS | 570 | 583 | 14 | 9.2E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Alpha,alpha-trehalase activity | Catalysis of the reaction: alpha,alpha-trehalose + H2O = 2 D-glucose. | ||
| Biological process | Trehalose metabolic process | The chemical reactions and pathways involving trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi4g1v0438200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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