Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PS50186

Description

DEP domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Electron carriers,protein disulfide oxidoreductases [Theobroma cacao] gi|508724219|gb|EOY16116.1| 22
Electron carriers,protein disulfide oxidoreductases [Theobroma cacao] gi|508724219|gb|EOY16116.1| 22
Electron protein, putative (Protein of unknown function, DUF547); TAIR: AT4G08550.2 electron carrier/ protein disulfide oxidoreductase; Swiss-Prot: sp|Q5AW24|IML1_EMENI Vacuolar membrane-associated protein iml1; TrEMBL-Plants: tr|A0A1J7HL05|A0A1J7HL05_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0150000 24
Electron protein, putative (Protein of unknown function, DUF547); TAIR: AT4G08550.2 electron carrier/ protein disulfide oxidoreductase; Swiss-Prot: sp|Q8TB45|DPTOR_HUMAN DEP domain-containing mTOR-interacting protein; TrEMBL-Plants: tr|A0A0B2PNK6|A0A0B2PNK6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0248200 23
Glutaredoxin-like protein; TAIR: AT3G11920.1 glutaredoxin-like protein; Swiss-Prot: sp|P0AC64|GLRX3_ECO57 Glutaredoxin 3; TrEMBL-Plants: tr|I1NCZ4|I1NCZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0017200 21
Glutaredoxin-like protein; TAIR: AT3G11920.1 glutaredoxin-like protein; Swiss-Prot: sp|Q9UTI2|GLRX2_SCHPO Glutaredoxin-2; TrEMBL-Plants: tr|V7ART9|V7ART9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0374200 21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67