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LotjaGi2g1v0017200.1

Overview

Field Value
Gene ID LotjaGi2g1v0017200
Transcript ID LotjaGi2g1v0017200.1
Lotus japonicus genome version Gifu v1.2
Description glutaredoxin-like protein; TAIR: AT3G11920.1 glutaredoxin-like protein; Swiss-Prot: sp|P0AC64|GLRX3_ECO57 Glutaredoxin 3; TrEMBL-Plants: tr|I1NCZ4|I1NCZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0017200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:5928545..5936019) extracted from Lotus japonicus Gifu genome v1.2.

AATTAACCATAACCTTAATTCACTCAAATCCAAATCCTCCACATTATAAAACCCCTCCCTGTGATTCCATTTCACACACT CTTCTTAACTCCCCTTTCTCTGCACTCTTCTCTAATCCAACACACACACTCAAAAACAAAAAAAAAATGGGTTTGGATGT AGAACAACAACAAGAACAACAACACATTTCAAGCCAAACCACAAACACTAGCCAAATTCAAAACCCCATTCCAACCGAAA ACCACGCCAACGGTAACATAGCCGTTAACACCACCACCACGACGCTCTCAATCGTCGAGCCTCATTCCCTTCTCCCCAAA CCCGCACCTCCAACGGCCTCCAACCACCGAAACGGCGTCGTTCGATCGTCGTCGTTCGGGAAGTTCCTCAGGCAGCGCAG CAACGACCTATCGTCCGCAATCGCCAGAGGGATCTCCTCGCTGAAGCTGCAATCGAATGACGACGACGACGGTGTGACGG AGTTCAACCTCTCCGGCATGAAGGTGGTGGTGACGGCGAAGAAAACCGACGCGTCGTTGGCGGCAACGGCGCGAGTGAGC TTCTTCTCGAGGTCGAATTGCAGGGATTGCGGTGCGGTTCGGCGATTCTTCAGGGAGAAAGGAGTGAAATTCGTGGAGAT CAATGTCGATGTGTACGCTGAGCGAGAGAGGGAGCTTCGAGAGAGAACAGGGAGCGCCACGGTGCCGAAGATTTTCTTCA ACGGGAAGCTAATCGGAGGGTTGGTGGAGCTTAATTTGATGAGGAAGGGTGGGGAATTGGAGGAGCGGCTGAGGGAGACG GCGGTGGATGGCGGCGATGGTCCGGCGGCGCCGGAGTACGGGTTTGATGAGGTGACGGCGGAGGAGATGGAGGAGGTTGC GGTGGTTAGGGTTCTGAGGCAGAGGCTGCCGATTCAGGATCGTTTGATGAAGATGAAGATTGTTAGGAACTGTTTCGCTG GGAGTGAATTGGTGGAGCTTCTCGTTCGTCACCATGGTTGTGATTCTTCCAAGGTACGTTTCGTTATTTTTCCACATACC GTATGCATACGTATTTGTTTTTGTTCTTGACCGTATAATTATACGGTTTTACGAAGTCTGGTACGCGTGTTTGGATACGC CTTTATTTCGTTTTGGATTAGTCTAATTTGTCTTTTTTGTAGAAAAATCAAGAGTCAGATTTGTCTTTAGAAATGGTGTT TGAGTTTTCATTTGACATATAAGCATGAAAGAAAAAACCTTGGTCCTTTTTATAAGAACTAAATGAAAGTTTGAGCTATA TTAATTAATTTTTTCCAATGATGCCCTTATTAATTCTAACTTGTAAAATGTGTTTCATTAATTATTCCCTCTCTTTTCCA CTTTCCAACACTAATAACAAAGGGTAATTTTGGAAGTTTATTTTGATTTAAGACAAATTTAATGCATTTTATCTTGTTTA ACTACATTTCTTAAAATATGTAAATTTTTTTTTGTTGCTTATAAATAGGACCGGAAGAAGTATTTAACACTTTGATCTAG GGATGTGGGTGGGAATGTGGGATGATAAAGAAAAACATTTGAAATTTAAAGGTAAGGGATATAAATAAAGAAATTAAATT GAAACATTTTAGAATTTTTTTTAAAAATATAACGTTCATTAACGTTGATTAATAATTTCTTAATTAATGGAAAAAGATAG TGCGTGTTTGCCTAAATAGCTCAATCATGTGCTTATAGCATATATATTCATTTTGGAAGCAATTATGTAAATAGTCTATT TTGAGCTTATTGTTATAATTGTTTATATTAATTATGAATAAGATATTATGCTTATCCATAACATTTTTTTAATTTATTTC AATAAAATTTTTAAATTAACTTATGAATTAGTGTATATGTGACAAACACATAGTGTCATAAGCGCTTAAATAATTTGTTT GTCCAAAGATCAATACACCTGAAGTATGTCTTCTGTCTGGCTTACATGTTCTTCAGAAGAGTTTATGCTATCTTTTAGGA AAATAAAAAATTCAATTGAATAACTATTTAACATGATAATTAATATTAATTAGATATTTATTTAACGTGAATAGTGTAGT ACTTAATGTTATTAGTTTACACCGTCGGTGCATAGAAATTAATCTCATGTTATTAACCGTGTCTTTTAATATTGTTCTCT AAATTTGTTAGAGAAAAAGTTTGATGCACCGACGGTGTAAATTTTTTTTACACCATCAACCAATTAGATTTCAAGGATGT GCCACGTCAATTAATGAAATTAAATAAAATGAGAGATTTTCTCGCATTCTTGAAATCTGATTGGTTGACGGTGTAAAAAA ACTTTACACCATCGGTGCATAGAAATTAAACTCAATTTGTTAACCAATTTCATTGATTAGGATATAAACTTAAGCAGTTA ATGACTAGTATTTATTAAAATTAAATAGATTATTTTATTAATGAGAATTAAATTGATGTTGCTCATATTAGAATTTACTA TTTGTCTTAGTTTTTTCTTCTCATTCTACATTTTTTATTTTTGGTAACAAAAGGAAGCTACATTTTTTATGTGGTAACAA ATATTTTAAAATGATTTTCTCGCTATAATTTTTAGACTAATATTTAAATTTCAACAGAAAGTTATTGAAGCTTTATTTTA TGATTTATGATTTATAATTTATCATTTAAAATCTTATTAATTTTGAATTTTAATTTATTTTTAGTTAGGAATAATAAATC ATGTAAATATTTAGGGGTTGTCTAAATGACCCATGAGAAAGTTTGTATTAAATACTCAATCATCAAATCACATTGGAGAC AGGTGAGTTGAAATTTCTATATTTTATTTATTAATTTATTTCCAACTCACTTATCTCTAATGTGATTTAATGATGAATTA TTTCATAATTTAACCCAAACTTTCTCCTATGTGATCCAGCATGAATTTTTAAAATGTAAAGATTTTACATACAATACATT AAAATTATGAGAAAAAGGTTGATGCAATTAGTAAGTTTTATTTATACATGCATTTAATTAATTTCCGCCATATCGATAAT TATGTTTTTATTATAATTCAAATTTAAAAGAAGTGTATCCACTAATTTTAAGTGGGCATAGTATGATTGGATGGTACAAT GCATAGAAATTAAACTGGTAATTTATTTCTTTTATTCGATTTTCTTTCAATGAAGTTTTGATTTTCTCGAGTGTTTTATT TTCAAAAATATTTTAATACTAATTTTTATGAACACGTAATATGCGAGCAATTTTAATAGCTATGAAGTAAACACCTAAAT GTCTAACACGCTTGATGTTTACAAGGCGAAACTTCTACTCCCGCTCAAACTTTTGGATTTGGAAAAGAAACAGAAGATAC TAATAATGACACACATGGTGGGGCTTATGAAACTTCTAAGGGATAGAAAACCAACCTCACGTGTCATAAATTTATTTCCG AAATAATAGTGAACTTTCTTTCAAAAGACCAAAAAAAATTGCTACTCCCTCCGGTCCTATTTATAAGCATGAAAGAGAAG AAAAATCTTGGTCCTTTTTATAAGAACCAAATGAAAGTTTGAGCTATATTAATTATTTTTTTCCAATGATGCCCTTATTA ATTCTAACTTGTAAAATGTGTCTCATTAATTATTCTCTCTCTTTCCCACTTTCCAATACTAATAATAAAGGGTAATTTTG GAAGTTTATTTTAATTCAAGACAAATTTAATGCATTTTATCTAGTTTAACTACATTTCTTAAACTATGTGAATTTTTTTT TTTGTTGCTTATAAATAGGACCGGAGGGAGTACCATTTAGCCTCCATTTATAGATCAGCTTTTAACAAATAGAGAAGGTG TGAGGGGAAAAAAATAATTCTTTGAAATGATTCAAATGCTTGATTCAAACGGGGTACATGCTTGATCGTACTTAAATAAG GTCTTAGGTTTCCCTTGTATCGTAGTAACATTTCTCTTAAATGCCCGCATTTTCAACCTTCATTTATAACCCGTGCTACT GTAAGCAAACTTCATTCACAAAATTAAGTTATGGCCAATTATTGTTACAATTTCCTTATCTATGATTGGTACACCACTGT AATAATTTGTAGTTTCTTTATATGATACATTTGTTTTAAAATTTACAATTTGAAACATTCTTTCACTTTCTGTAATGTTT CATTCCAAAACAAATGTTTAGGCTGTTGAGATCGGGAAAGAGTTATGCAAGAAGCATTTCATCCATCATGTTTTCGGGTA AGAAAATTGCTCGAGACTAATGAGACTACGCGTCCATCTTAAGATAGATAATTTTTTTCTTCTCATTGCCAATTTTCTTC TGTAGGGAAAATGATTTCGAAGAGGGAAACCACTTCTATCGATTCCTAGAACATGAACCGTTTATCTCCAAATGCTTTAA TTTTCGCGTCTCCACTAATGATAGTGAACCGAAGAGTGCAGCCGCAGTTTTTGATAGGCTCACCAAGATTATGTATGCCA TTCTTGAGTCTTATGCTTCTGATGACAGGCGGCATGTTGATTATGCAGGCATTAGCAAAAGTGAGGAATTTAGGAGGTAC AGTAAGGTTTAATAGTATAGATTTGTATTGAAATGTTTATTTTGGTACATATTGTGAATGCAAACGTTCAGTGGATTTGC TCAACATGCCTACTATAAATTTAGTATCATATGGTCAATTTGTAGAAGGCATTTGCCATTTAACTTGTTCATTTGGTCCC TCTACTAATTCTTAACCCCATTTATTGCTAACACATAATTTTGTAAAAGTTCAGATCCCTTCTGAGTTAATTCTGAATGC ATTATGTGTGAACTGAAAAGAATTAATGCCTTGATTTTCACGGAAGAACTAAGGAATGTTTGTATTCACTGAGTCCTAAA TGCTCCTTCTTACCTCTTCAAATTGAATCTCCCTTGGTTGGAGTGTTGTTTGCATATCTGATTAGCTTTTAAGTTTAACT CCTCTTAATGCAAATTCCTGGAATTTCTGACATTTGCAATGTGATTCTGGATGCCTATATGAGTGGAATCTAGACTTAGT TACTGACAGCAGCATCCAATTTTATTTTATTTCATTTCTGCTGATAAAGTAATAATTACAAACCAAGGATCAAGTGATAG TGGTAAGAACACTTCCGAGCAGCGATGCTGAAACAAGATGACTTCTTGCTGTCTCTGGAGAACTTTTTTGTTTTTTTGCC CTGCATCAATGTCCACTGAGTTAGTAAGATTGTTGTCTGGGTTTTAAACAGCGGTTGCACTTGTGGCTGCGACACAGAAT TACGGTCAAATGCGGGCTGATTCCGCCACAAATGCGGTCGCGATGCCGTTGCGGAGAATCGATAACCCTTTACGTTGCGA GTGCAAACCGCAATTTAAAACCTGATTGTTGTTACCTTTTTATCCAGTACATGAATAACAGAAGACCTAAAGCATTCATT TCCATGACTTATATCTGATCTTAGGTGCATGTATCTCATATATGAGTAGAACTTCTCAGTTTGTTCAAGCCTTCAGAATC AGATACTTATGATGTGCTTATGACTAACTTGAAAAGATAGGGTGACATGTGACTGTAATCTCCTATACCACCTTTTACAT GTCTAAAGTGATTTTTCTTCATGTTTTGTTCATGTTTTTCTTCAAACTGTAGGTATGTGAACATGACCCAAGATCTGCAG AGGGTGGATCTTTTGGAACTATCAGAAAAAGAGAAGCTTGCCTATTTCTTAAACTTGTATAATGCCATGGTCATCCATGC CGTTATTAGAGTAGGGTGTGAAGAAGGTCTAGTTACTAGGAGATCTTTCTCTGATTTCCACTATTTGATTGGAGGACATG CTTACTCTCTAAGTACTATAAAAAATGGTATCATTAGAAGCAATAGGAGGTCACCATACTCCTTGGTCAAGCCCTTTGGC ACAGGAGACAGGCAGTTAGAGGTAATTTGTTTTCCATTATTAAATTGTTGAGTATTTTTTCCCATTCATTTTGTGGAAAA TTGCTATTTCAATTGAAATTTCAAGAGCCAACTATCCCAGAAGCTTAAGCTGTTGGACGAAGAGTCATGAATGGTTTGAT ATTATACATCTAATACGCCCCTCAGGCAAGAGCTCATTGGCTTTGGTTGAAACATGGAAATGCACGATCCCACCATTTTG CTGAATTCAACTTTTTTATTAGAATAATGAGGGAACTCAAGACCACTTAGTCATATAGATTTTGATACCATATCATGAAC CAACTACCCCAGAAGCTGAAGTTGTTGGGTGAAGATACATGGATTGTTTTATATTATACTTCTAACTTGAAATAATTTCC TGTAATTTATCACATGATTGCATATGAAGATATATTAACTTGCTCCTACCAAACTGCAGCATTCTCTTACCAAAATGAAT CCTCTAGTTCACTTTGGACTATGTAATGGTACAAAGTCTAGCCCAAAGGTGAGGTTTTTCTCACCCTATAGAGTTGCAGA AGAATTGAGATGTGCTGCTAGAGAGTTCTTTGAGAGTGATGGCATTGAAGTAGACCTGGAAAAGAGGACTATTCATCTCA CTCCAATTTTCAAGTGGTGAGCAGTTAGTGAGTTTCTGCGGTATTGATTTTAACTTTAAATTTCTAGCACTCTGCTTATG AAATATTTATTTTGGCAGGTATTCTATGGATTTTGGACAAGAGAAAAACATAGTAAAGTGGATAATAAATTACTTGGATG CAAATAAAGCTGGTCTTTTGACACATCTTTTAGCTGATGGTGGTCCTGTTAATATATCATACAAGAATTACGATTGGTCA ATAAATTCTTGAACACTAGTAAGTGCGTGTTTTGAAATCCTTTTCTAATTGATTCTGAAGCTTAATCCAATTATGAGGAG AAGCTTCTATAAGTAGATTTTGGGTGTCATAGTAAACTCGTAGAAAAAGAAGCTGATCCAATCATGCTATATTTGATTCA GCTCCTGTAGCCACTGAATTTACGAGAAGTCTATTGTACATATCTCAGGTTTTGATTTCTTAATGATTTGAATTTTGAAA CAAAGAATTTGATTGATATCACACTGAAATAGAGAATATAGATGAGGTATTACTCTTAGATTGTTCAATTTGTAAGCCTA AACCTGGCACTGGGACACACGGTTGAGGTGCAGAAGTTGTAGATTTGACTGTTATAGCTTACATCTAAAAGAAAAAACAA AGGTGGGTCAAGGTTAAACACATTTTATCATACGCAAGTCTGAAAGTAATAGCATCTGGAAGAGAATCGGTGAATCCACA TTAGTTTTTCTAACCACAGTAGCTATGATGTATGTAATCTGCTTCCTCTCATGGAGCTAGCAACATATTTGACATTAGTT TGATTTGATAATGAGTTGGGGTCTCATGGAGTTGGTGGGGTTTGATTTTTTTCCCCTCCATTCATCCTATTGGTTCCTTG ATAGCAGTCTTCCCTTTACTAGATTCTAATCATTT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0017200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTTGGATGTAGAACAACAACAAGAACAACAACACATTTCAAGCCAAACCACAAACACTAGCCAAATTCAAAACCC CATTCCAACCGAAAACCACGCCAACGGTAACATAGCCGTTAACACCACCACCACGACGCTCTCAATCGTCGAGCCTCATT CCCTTCTCCCCAAACCCGCACCTCCAACGGCCTCCAACCACCGAAACGGCGTCGTTCGATCGTCGTCGTTCGGGAAGTTC CTCAGGCAGCGCAGCAACGACCTATCGTCCGCAATCGCCAGAGGGATCTCCTCGCTGAAGCTGCAATCGAATGACGACGA CGACGGTGTGACGGAGTTCAACCTCTCCGGCATGAAGGTGGTGGTGACGGCGAAGAAAACCGACGCGTCGTTGGCGGCAA CGGCGCGAGTGAGCTTCTTCTCGAGGTCGAATTGCAGGGATTGCGGTGCGGTTCGGCGATTCTTCAGGGAGAAAGGAGTG AAATTCGTGGAGATCAATGTCGATGTGTACGCTGAGCGAGAGAGGGAGCTTCGAGAGAGAACAGGGAGCGCCACGGTGCC GAAGATTTTCTTCAACGGGAAGCTAATCGGAGGGTTGGTGGAGCTTAATTTGATGAGGAAGGGTGGGGAATTGGAGGAGC GGCTGAGGGAGACGGCGGTGGATGGCGGCGATGGTCCGGCGGCGCCGGAGTACGGGTTTGATGAGGTGACGGCGGAGGAG ATGGAGGAGGTTGCGGTGGTTAGGGTTCTGAGGCAGAGGCTGCCGATTCAGGATCGTTTGATGAAGATGAAGATTGTTAG GAACTGTTTCGCTGGGAGTGAATTGGTGGAGCTTCTCGTTCGTCACCATGGTTGTGATTCTTCCAAGGCTGTTGAGATCG GGAAAGAGTTATGCAAGAAGCATTTCATCCATCATGTTTTCGGGGAAAATGATTTCGAAGAGGGAAACCACTTCTATCGA TTCCTAGAACATGAACCGTTTATCTCCAAATGCTTTAATTTTCGCGTCTCCACTAATGATAGTGAACCGAAGAGTGCAGC CGCAGTTTTTGATAGGCTCACCAAGATTATGTATGCCATTCTTGAGTCTTATGCTTCTGATGACAGGCGGCATGTTGATT ATGCAGGCATTAGCAAAAGTGAGGAATTTAGGAGGTATGTGAACATGACCCAAGATCTGCAGAGGGTGGATCTTTTGGAA CTATCAGAAAAAGAGAAGCTTGCCTATTTCTTAAACTTGTATAATGCCATGGTCATCCATGCCGTTATTAGAGTAGGGTG TGAAGAAGGTCTAGTTACTAGGAGATCTTTCTCTGATTTCCACTATTTGATTGGAGGACATGCTTACTCTCTAAGTACTA TAAAAAATGGTATCATTAGAAGCAATAGGAGGTCACCATACTCCTTGGTCAAGCCCTTTGGCACAGGAGACAGGCAGTTA GAGCATTCTCTTACCAAAATGAATCCTCTAGTTCACTTTGGACTATGTAATGGTACAAAGTCTAGCCCAAAGGTGAGGTT TTTCTCACCCTATAGAGTTGCAGAAGAATTGAGATGTGCTGCTAGAGAGTTCTTTGAGAGTGATGGCATTGAAGTAGACC TGGAAAAGAGGACTATTCATCTCACTCCAATTTTCAAGTGGTATTCTATGGATTTTGGACAAGAGAAAAACATAGTAAAG TGGATAATAAATTACTTGGATGCAAATAAAGCTGGTCTTTTGACACATCTTTTAGCTGATGGTGGTCCTGTTAATATATC ATACAAGAATTACGATTGGTCAATAAATTCTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0017200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGLDVEQQQEQQHISSQTTNTSQIQNPIPTENHANGNIAVNTTTTTLSIVEPHSLLPKPAPPTASNHRNGVVRSSSFGKF LRQRSNDLSSAIARGISSLKLQSNDDDDGVTEFNLSGMKVVVTAKKTDASLAATARVSFFSRSNCRDCGAVRRFFREKGV KFVEINVDVYAERERELRERTGSATVPKIFFNGKLIGGLVELNLMRKGGELEERLRETAVDGGDGPAAPEYGFDEVTAEE MEEVAVVRVLRQRLPIQDRLMKMKIVRNCFAGSELVELLVRHHGCDSSKAVEIGKELCKKHFIHHVFGENDFEEGNHFYR FLEHEPFISKCFNFRVSTNDSEPKSAAAVFDRLTKIMYAILESYASDDRRHVDYAGISKSEEFRRYVNMTQDLQRVDLLE LSEKEKLAYFLNLYNAMVIHAVIRVGCEEGLVTRRSFSDFHYLIGGHAYSLSTIKNGIIRSNRRSPYSLVKPFGTGDRQL EHSLTKMNPLVHFGLCNGTKSSPKVRFFSPYRVAEELRCAAREFFESDGIEVDLEKRTIHLTPIFKWYSMDFGQEKNIVK WIINYLDANKAGLLTHLLADGGPVNISYKNYDWSINS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 36 36 - –
PANTHER
PTHR46361:SF4
2 597 596 0.0 –
PANTHER
PTHR46361
2 597 596 0.0 –
ProSiteProfiles
PS51354
125 222 98 17.979
IPR002109
SUPERFAMILY
SSF52833
130 217 88 5.99E-19
IPR036249
Gene3D
G3DSA:3.40.30.10
132 220 89 2.3E-20
IPR036249
Pfam
PF00462
138 196 59 3.3E-15
IPR002109
Gene3D
G3DSA:1.10.10.10
238 372 135 3.7E-20
IPR036388
CDD
cd04371
242 320 79 9.87295E-19 –
SUPERFAMILY
SSF46785
246 335 90 4.68E-23
IPR036390
ProSiteProfiles
PS50186
250 323 74 9.977
IPR000591
SMART
SM00049
250 323 74 1.2E-17
IPR000591
Pfam
PF00610
254 321 68 6.4E-17
IPR000591
Pfam
PF04784
400 524 125 1.7E-31
IPR006869
Coils
Coil
597 597 1 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009055
Molecular function Electron transfer activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
Subterm of
GO:0015035
Molecular function Protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
Subterm of
GO:0035556
Biological process Intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
Subterm of
GO:0045454
Biological process Cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0017200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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