Domain Predictions — View

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PTHR11467:SF109

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0078100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A0L9VAR9\|A0A0L9VAR9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14
LotjaGi4g1v0078100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A072UMI4\|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14
LotjaGi4g1v0078100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A072UMI4\|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14
LotjaGi4g1v0078100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A072UMI4\|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14
LotjaGi4g1v0078100_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A072UMI4\|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14
LotjaGi4g1v0078100_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A072UMI4\|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14
LotjaGi4g1v0078100_LC.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone H1; TAIR: AT5G08780.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp\|Q9FYS5\|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr\|A0A072UMI4\|A0A072UMI4_MEDTR Linker histone H1 and h5 family protein; Found in the gene: LotjaGi4g1v0078100_LC	Domains G3DSA:1.10.10.10 IPR005818 IPR017956 IPR036388 IPR036390 PF00538 PR00929 PS51504 PTHR11467 PTHR11467:SF109 SM00384 SM00526 SSF46785 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29