Domain Predictions — View

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PTHR13402

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0048208 View details of GO:0048208 AmiGO InterPro QuickGO	Biological process	COPII vesicle coating	The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.	Subterm of GO:0006901 GO:0065003 Part of GO:0048207 GO:0090114

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v2001780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec16B-like isoform X1 [Cicer arietinum] gi\|502160258\|ref\|XP_004511686.1\|	Domains IPR024298 IPR024340 IPR024880 PF12931 PF12932 PTHR13402 cd09233 mobidb-lite	8
Lj4g3v1259080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec16B-like isoform X1 [Cicer arietinum] gi\|502160258\|ref\|XP_004511686.1\|	Domains IPR024298 IPR024340 IPR024880 PF12931 PF12932 PTHR13402 cd09233 mobidb-lite	8
LotjaGi2g1v0423400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec16B; TAIR: AT5G47490.1 RGPR-like protein; Swiss-Prot: sp\|Q9FGK8\|SC16B_ARATH Protein transport protein SEC16B homolog; TrEMBL-Plants: tr\|I1LGQ3\|I1LGQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0423400	Domains G3DSA:1.25.40.1030 IPR024298 IPR024340 IPR024880 PF12931 PF12932 PTHR13402 PTHR13402:SF6 cd09233 mobidb-lite	10
LotjaGi4g1v0202800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec16B; TAIR: AT5G47490.1 RGPR-like protein; Swiss-Prot: sp\|Q9FGK8\|SC16B_ARATH Protein transport protein SEC16B homolog; TrEMBL-Plants: tr\|G7JIV9\|G7JIV9_MEDTR RGPR-like protein; Found in the gene: LotjaGi4g1v0202800	Domains IPR024298 IPR024340 IPR024880 PF12931 PF12932 PTHR13402 PTHR13402:SF6 cd09233 mobidb-lite	9
LotjaGi4g1v0202800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec16B; TAIR: AT5G47490.1 RGPR-like protein; Swiss-Prot: sp\|Q9FGK8\|SC16B_ARATH Protein transport protein SEC16B homolog; TrEMBL-Plants: tr\|G7JIV9\|G7JIV9_MEDTR RGPR-like protein; Found in the gene: LotjaGi4g1v0202800	Domains IPR024298 IPR024340 IPR024880 PF12931 PF12932 PTHR13402 PTHR13402:SF6 cd09233 mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00