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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1259080 |
| Transcript ID | Lj4g3v1259080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein transport protein Sec16B-like isoform X1 [Cicer arietinum] gi|502160258|ref|XP_004511686.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 48 | 107 | 60 | – | – | |
| PANTHER | 137 | 376 | 240 | 0 | ||
| MobiDBLite | 173 | 192 | 20 | – | – | |
| MobiDBLite | 208 | 230 | 23 | – | – | |
| PANTHER | 399 | 1368 | 970 | 0 | ||
| MobiDBLite | 399 | 471 | 73 | – | – | |
| MobiDBLite | 514 | 536 | 23 | – | – | |
| Pfam | 541 | 662 | 122 | 2.70E-23 | ||
| CDD | 609 | 980 | 372 | 2.89E-96 | – | |
| Pfam | 724 | 984 | 261 | 1.70E-55 | ||
| MobiDBLite | 1011 | 1097 | 87 | – | – | |
| MobiDBLite | 1175 | 1209 | 35 | – | – | |
| MobiDBLite | 1258 | 1304 | 47 | – | – | |
| MobiDBLite | 1320 | 1345 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | COPII vesicle coating | The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat. |
Expression pattern of Lj4g3v1259080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1259080.1, powered by CORGI.
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