Domain Predictions — View

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PTHR21493:SF246

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0552900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein GOT1; TAIR: AT1G05785.6 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp\|Q6NMM1\|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr\|I3T6C6\|I3T6C6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0552900	Domains CYTOPLASMIC_DOMAIN IPR007305 NON_CYTOPLASMIC_DOMAIN PF04178 PTHR21493 PTHR21493:SF246 TMhelix TRANSMEMBRANE	8
LotjaGi4g1v0154600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein GOT1; TAIR: AT1G05785.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp\|Q6NMM1\|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr\|A2Q4X9\|A2Q4X9_MEDTR Got1-like protein; Found in the gene: LotjaGi4g1v0154600_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR21493 PTHR21493:SF246 TMhelix TRANSMEMBRANE	7
LotjaGi4g1v0154600_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein GOT1; TAIR: AT1G05785.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp\|Q6NMM1\|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr\|A2Q4X9\|A2Q4X9_MEDTR Got1-like protein; Found in the gene: LotjaGi4g1v0154600_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR21493 PTHR21493:SF246 TMhelix TRANSMEMBRANE	7
LotjaGi4g1v0154600_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein GOT1; TAIR: AT1G05785.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp\|Q6NMM1\|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr\|A2Q4X9\|A2Q4X9_MEDTR Got1-like protein; Found in the gene: LotjaGi4g1v0154600_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR21493 PTHR21493:SF246 TMhelix TRANSMEMBRANE	7
LotjaGi4g1v0154600_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein GOT1; TAIR: AT1G05785.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp\|Q6NMM1\|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr\|A2Q4X9\|A2Q4X9_MEDTR Got1-like protein; Found in the gene: LotjaGi4g1v0154600_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR21493 PTHR21493:SF246 TMhelix TRANSMEMBRANE	7
LotjaGi4g1v0154600_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein GOT1; TAIR: AT1G05785.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp\|Q6NMM1\|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr\|A2Q4X9\|A2Q4X9_MEDTR Got1-like protein; Found in the gene: LotjaGi4g1v0154600_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR21493 PTHR21493:SF246 TMhelix TRANSMEMBRANE	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	16.67