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IPR007305 is a Vesicle transport protein, Got1/SFT2-like.
<p>Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae. Got1 is thought to facilitate Sed5-dependent fusion events [[cite:PUB00009891]]. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein ([swissprot:P38166]) [[cite:PUB00015208]]. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments [[cite:PUB00009891]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: vesicle transport protein SFT2B-like [Cicer arietinum] gi|502124339|ref|XP_004498485.1| | 9 | ||
| – | PREDICTED: vesicle transport protein SFT2B-like [Cicer arietinum] gi|502124339|ref|XP_004498485.1| | 8 | ||
| – | PREDICTED: vesicle transport protein SFT2B-like [Cicer arietinum] gi|502124339|ref|XP_004498485.1| | 9 | ||
| – | PREDICTED: vesicle transport protein SFT2B-like [Cicer arietinum] gi|502162821|ref|XP_004512626.1| | 9 | ||
| – | PREDICTED: vesicle transport protein GOT1A-like [Glycine max] gi|356567294|ref|XP_003551856.1| | 8 | ||
| – | PREDICTED: protein transport protein SFT2-like [Cicer arietinum] gi|502099664|ref|XP_004491532.1| | 10 | ||
| – | PREDICTED: vesicle transport protein GOT1A-like [Glycine max] gi|356521687|ref|XP_003529484.1| | 8 | ||
| – | Vesicle transport protein; TAIR: AT4G26550.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|P38166|SFT2_YEAST Protein transport protein SFT2; TrEMBL-Plants: tr|V7B2J2|V7B2J2_PHAVU Vesicle transport protein; Found in the gene: LotjaGi1g1v0013600 | 10 | ||
| – | Protein transport protein GOT1; TAIR: AT3G49420.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|Q6NMM1|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr|I3SIP6|I3SIP6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0050500 | 8 | ||
| – | Vesicle transport protein; TAIR: AT5G24170.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B; TrEMBL-Plants: tr|V7CXA0|V7CXA0_PHAVU Vesicle transport protein; Found in the gene: LotjaGi1g1v0234100 | 9 | ||
| – | Vesicle transport protein; TAIR: AT5G24170.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B; TrEMBL-Plants: tr|I1N770|I1N770_SOYBN Vesicle transport protein; Found in the gene: LotjaGi1g1v0234100 | 9 | ||
| – | Vesicle transport protein; TAIR: AT5G24170.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B; TrEMBL-Plants: tr|B7FHE2|B7FHE2_MEDTR Vesicle transport protein; Found in the gene: LotjaGi1g1v0234100 | 9 | ||
| – | Vesicle transport protein; TAIR: AT5G24170.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B; TrEMBL-Plants: tr|V7CXA0|V7CXA0_PHAVU Vesicle transport protein; Found in the gene: LotjaGi1g1v0234100 | 9 | ||
| – | Protein transport protein GOT1; TAIR: AT1G05785.6 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|Q6NMM1|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr|I3T6C6|I3T6C6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0552900 | 8 | ||
| – | Vesicle transport protein; TAIR: AT5G23550.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B; TrEMBL-Plants: tr|I3SKB3|I3SKB3_LOTJA Vesicle transport protein; Found in the gene: LotjaGi2g1v0166100 | 9 | ||
| – | Vesicle transport protein; TAIR: AT5G23550.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B; TrEMBL-Plants: tr|I3SKB3|I3SKB3_LOTJA Vesicle transport protein; Found in the gene: LotjaGi2g1v0166100 | 9 | ||
| – | Vesicle transport protein; TAIR: AT4G26550.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|P38166|SFT2_YEAST Protein transport protein SFT2; TrEMBL-Plants: tr|G7IXT8|G7IXT8_MEDTR Vesicle transport protein; Found in the gene: LotjaGi6g1v0139500 | 9 | ||
| – | Protein transport protein GOT1; TAIR: AT3G49420.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|Q6NMM1|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr|K7L3E9|K7L3E9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0179300 | 8 | ||
| – | Protein transport protein GOT1; TAIR: AT3G49420.1 Got1/Sft2-like vescicle transport protein family; Swiss-Prot: sp|Q6NMM1|GOT1_ARATH Vesicle transport protein GOT1; TrEMBL-Plants: tr|V7AZM0|V7AZM0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0179300 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TRANSMEMBRANE | Phobius | 1 | 5.26 |