Domain Predictions — View

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PTHR31225:SF42

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0095100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp\|Q6Q3H3\|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr\|Q5UBY0\|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0095100	Domains G3DSA:1.10.600.10 G3DSA:1.50.10.130 IPR001906 IPR005630 IPR008930 IPR008949 IPR034741 IPR036965 NON_CYTOPLASMIC_DOMAIN PF01397 PF03936 PTHR31225 PTHR31225:SF42 SFLDG01019 SFLDS00005 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48239 SSF48576 cd00684	22
LotjaGi3g1v0101800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp\|Q6Q3H3\|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr\|Q5UBY0\|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0101800	Domains G3DSA:1.10.600.10 G3DSA:1.50.10.130 IPR001906 IPR005630 IPR008930 IPR008949 IPR034741 IPR036965 NON_CYTOPLASMIC_DOMAIN PF01397 PF03936 PTHR31225 PTHR31225:SF42 SFLDG01019 SFLDS00005 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48239 SSF48576 cd00684	22
LotjaGi3g1v0223800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Sesquiterpene synthase, putative; TAIR: AT5G23960.1 terpene synthase 21; Swiss-Prot: sp\|Q6Q3H3\|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr\|A0A0L9TED3\|A0A0L9TED3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0223800	Domains G3DSA:1.10.600.10 G3DSA:1.50.10.130 IPR001906 IPR005630 IPR008930 IPR008949 IPR036965 PF01397 PF03936 PTHR31225 PTHR31225:SF42 SSF48239 SSF48576	13
LotjaGi3g1v0224100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Sesquiterpene synthase, putative; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp\|Q6Q3H3\|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr\|A2Q649\|A2Q649_MEDTR Terpene synthase family, metal-binding domain protein; Found in the gene: LotjaGi3g1v0224100	Domains G3DSA:1.10.600.10 G3DSA:1.50.10.130 IPR001906 IPR005630 IPR008930 IPR008949 IPR034741 IPR036965 PF01397 PF03936 PTHR31225 PTHR31225:SF42 SFLDG01019 SFLDS00005 SSF48239 SSF48576 cd00684	17
LotjaGi3g1v0334200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp\|Q6Q3H3\|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr\|Q5UBY0\|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0334200	Domains Coil G3DSA:1.10.600.10 G3DSA:1.50.10.130 IPR001906 IPR005630 IPR008930 IPR008949 IPR034741 IPR036965 NON_CYTOPLASMIC_DOMAIN PF01397 PF03936 PTHR31225 PTHR31225:SF42 SFLDG01019 SFLDS00005 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48239 SSF48576 cd00684	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00684	CDD	1	20.00