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PF03936

Source: Pfam

Description

Terpene synthase family, metal binding domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0010333
Molecular function Terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
Subterm of
GO:0016829
Molecular function Lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
Subterm of

Associated Lotus transcripts 63

Transcript Name Description Predicted domains Domain count
Lj0g3v0094939.1
– PREDICTED: myrcene synthase, chloroplastic-like isoform X1 [Cicer arietinum] gi|502088156|ref|XP_004488753.1|
Domains
14
Lj0g3v0094939.2
– PREDICTED: myrcene synthase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502088145|ref|XP_004488751.1|
Domains
12
Lj0g3v0102559.1
– PREDICTED: (-)-germacrene D synthase-like [Cicer arietinum] gi|502084145|ref|XP_004487631.1|
Domains
12
Lj0g3v0168849.1
– (+)-delta-cadinene synthase isozyme C2 [Medicago truncatula] gi|357452577|ref|XP_003596565.1|
Domains
9
Lj0g3v0185159.1
– (+)-delta-cadinene synthase isozyme C2 [Medicago truncatula] gi|357452577|ref|XP_003596565.1|
Domains
12
Lj0g3v0198989.1
– PREDICTED: LOW QUALITY PROTEIN: (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial-like [Glycine max] gi|356519513|ref|XP_003528417.1|
Domains
13
Lj0g3v0198989.2
– PREDICTED: LOW QUALITY PROTEIN: (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial-like [Glycine max] gi|356519513|ref|XP_003528417.1|
Domains
13
Lj0g3v0198989.3
– PREDICTED: LOW QUALITY PROTEIN: (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial-like [Glycine max] gi|356519513|ref|XP_003528417.1|
Domains
7
Lj0g3v0221889.1
– PREDICTED: (-)-germacrene D synthase-like [Cicer arietinum] gi|502143804|ref|XP_004505471.1|
Domains
14
Lj0g3v0244769.1
– PREDICTED: (-)-germacrene D synthase-like [Cicer arietinum] gi|502143804|ref|XP_004505471.1|
Domains
21
Lj0g3v0250739.1
– PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Cicer arietinum] gi|502087483|ref|XP_004488548.1|
Domains
15
Lj0g3v0250739.2
– PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Cicer arietinum] gi|502087483|ref|XP_004488548.1|
Domains
15
Lj0g3v0251619.1
– PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356503551|ref|XP_003520571.1|
Domains
13
Lj0g3v0286679.1
– PREDICTED: (-)-germacrene D synthase-like [Cicer arietinum] gi|502084145|ref|XP_004487631.1|
Domains
7
Lj0g3v0306569.1
– Linalool synthase [Medicago truncatula] gi|357498837|ref|XP_003619707.1|
Domains
12
Lj0g3v0315869.1
– PREDICTED: R-linalool synthase, chloroplastic-like [Glycine max] gi|356543756|ref|XP_003540326.1|
Domains
16
Lj0g3v0356449.1
– PREDICTED: LOW QUALITY PROTEIN: isoprene synthase, chloroplastic-like [Glycine max] gi|356515248|ref|XP_003526313.1|
Domains
13
Lj1g3v0682850.3
– PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356570580|ref|XP_003553463.1|
Domains
14
Lj1g3v0682850.4
– PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356503551|ref|XP_003520571.1|
Domains
14
Lj1g3v0682850.5
– PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356503551|ref|XP_003520571.1|
Domains
7
Lj1g3v4434270.1
– PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356503551|ref|XP_003520571.1|
Domains
17
Lj1g3v4434270.2
– Terpene synthase-like; Terpenoid synthase [Medicago truncatula] gi|124360263|gb|ABN08276.1|
Domains
12
Lj1g3v4434270.3
– PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like [Glycine max] gi|356503551|ref|XP_003520571.1|
Domains
17
Lj3g3v0807750.1
– PREDICTED: myrcene synthase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502088145|ref|XP_004488751.1|
Domains
7
Lj3g3v0948400.1
– PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Cicer arietinum] gi|502087483|ref|XP_004488548.1|
Domains
17
Lj3g3v2888440.1
– RecName: Full=Tricyclene synthase EBOS, chloroplastic; AltName: Full=(E)-beta-ocimene synthase; Short=LjEBOS; Short=LjEbetaOS; AltName: Full=Terpenoid synthase 2; Short=LjTPS2; Flags: Precursorgi|50898180|gb|AAT86042.1| E-beta-ocimene synthase [Lotus japonicus] gi|75253430|sp|Q672F7.1|TPS2_LOTJA
Domains
14
Lj3g3v2888450.1
– RecName: Full=Tricyclene synthase EBOS, chloroplastic; AltName: Full=(E)-beta-ocimene synthase; Short=LjEBOS; Short=LjEbetaOS; AltName: Full=Terpenoid synthase 2; Short=LjTPS2; Flags: Precursorgi|50898180|gb|AAT86042.1| E-beta-ocimene synthase [Lotus japonicus] gi|75253430|sp|Q672F7.1|TPS2_LOTJA
Domains
14
Lj3g3v3653420.1
– (E E)-alpha-farnesene synthase [Medicago truncatula] gi|357501877|ref|XP_003621227.1|
Domains
7
Lj3g3v3653420.2
– PREDICTED: (E,E)-alpha-farnesene synthase-like [Glycine max] gi|356565739|ref|XP_003551095.1|
Domains
14
Lj4g3v0411600.1
– PREDICTED: LOW QUALITY PROTEIN: isoprene synthase, chloroplastic-like [Glycine max] gi|356515248|ref|XP_003526313.1|
Domains
10
Lj6g3v2135290.1
– Linalool synthase [Medicago truncatula] gi|357446233|ref|XP_003593394.1|
Domains
12
LotjaGi1g1v0228700.1
– Copalyldiphosphate synthase; TAIR: AT4G02780.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|O04408|KSA_PEA Ent-copalyl diphosphate synthase, chloroplastic; TrEMBL-Plants: tr|K7KF95|K7KF95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0228700
Domains
16
LotjaGi1g1v0228700.2
– Copalyldiphosphate synthase; TAIR: AT4G02780.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|O04408|KSA_PEA Ent-copalyl diphosphate synthase, chloroplastic; TrEMBL-Plants: tr|K7KF95|K7KF95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0228700
Domains
16
LotjaGi1g1v0718300.1
– Copalyldiphosphate synthase; TAIR: AT4G02780.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|O04408|KSA_PEA Ent-copalyl diphosphate synthase, chloroplastic; TrEMBL-Plants: tr|K7KF95|K7KF95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718300
Domains
18
LotjaGi1g1v0718300.2
– Copalyldiphosphate synthase; TAIR: AT4G02780.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|O04408|KSA_PEA Ent-copalyl diphosphate synthase, chloroplastic; TrEMBL-Plants: tr|A0A072TW04|A0A072TW04_MEDTR Copalyldiphosphate synthase; Found in the gene: LotjaGi1g1v0718300
Domains
18
LotjaGi2g1v0279700.1
– Nerol synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|A0A072UY90|A0A072UY90_MEDTR (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase; Found in the gene: LotjaGi2g1v0279700
Domains
16
LotjaGi3g1v0095100.1
– Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|Q5UBY0|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0095100
Domains
22
LotjaGi3g1v0099800.1
– Monoterpene synthase; TAIR: AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|B9T536|TPS10_RICCO Terpene synthase 10; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0099800
Domains
7
LotjaGi3g1v0099800.2
– Monoterpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0099800
Domains
17
LotjaGi3g1v0101800.1
– Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|Q5UBY0|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0101800
Domains
22
LotjaGi3g1v0103100.1
– Monoterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0103100
Domains
17
LotjaGi3g1v0103100.2
– Monoterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0103100
Domains
17
LotjaGi3g1v0103100.3
– Monoterpene synthase; TAIR: AT3G25820.1 terpene synthase-like sequence-1,8-cineole; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V8U9|A0A072V8U9_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0103100
Domains
7
LotjaGi3g1v0132900.1
– Kaurene synthase; TAIR: AT1G79460.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|Q39548|KSB_CUCMA Ent-kaur-16-ene synthase, chloroplastic; TrEMBL-Plants: tr|K7L745|K7L745_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0132900
Domains
23
LotjaGi3g1v0132900.2
– Kaurene synthase; TAIR: AT1G79460.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|Q39548|KSB_CUCMA Ent-kaur-16-ene synthase, chloroplastic; TrEMBL-Plants: tr|K7L745|K7L745_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0132900
Domains
18
LotjaGi3g1v0133000.1
– Terpene synthase; TAIR: AT1G79460.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein; Swiss-Prot: sp|Q39548|KSB_CUCMA Ent-kaur-16-ene synthase, chloroplastic; TrEMBL-Plants: tr|A0A151RPM8|A0A151RPM8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0133000
Domains
18
LotjaGi3g1v0193400.1
– Sesquiterpene synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|B9RHP7|TPS11_RICCO Probable terpene synthase 11; TrEMBL-Plants: tr|K7LVZ0|K7LVZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0193400
Domains
7
LotjaGi3g1v0193400.2
– Sesquiterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|B9RHP7|TPS11_RICCO Probable terpene synthase 11; TrEMBL-Plants: tr|K7LVZ0|K7LVZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0193400
Domains
18
LotjaGi3g1v0223800.1
– Sesquiterpene synthase, putative; TAIR: AT5G23960.1 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|A0A0L9TED3|A0A0L9TED3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0223800
Domains
13
LotjaGi3g1v0224000.1
– Sesquiterpene synthase, putative; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|F6M8H7|SMST_SANMU Probable sesquiterpene synthase; TrEMBL-Plants: tr|A2Q649|A2Q649_MEDTR Terpene synthase family, metal-binding domain protein; Found in the gene: LotjaGi3g1v0224000
Domains
10
LotjaGi3g1v0224100.1
– Sesquiterpene synthase, putative; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|A2Q649|A2Q649_MEDTR Terpene synthase family, metal-binding domain protein; Found in the gene: LotjaGi3g1v0224100
Domains
17
LotjaGi3g1v0233200.1
– Terpenoid synthase; TAIR: AT5G23960.1 terpene synthase 21; Swiss-Prot: sp|F6M8H7|SMST_SANMU Probable sesquiterpene synthase; TrEMBL-Plants: tr|G7ITN9|G7ITN9_MEDTR Terpene synthase family, metal-binding domain protein; Found in the gene: LotjaGi3g1v0233200
Domains
7
LotjaGi3g1v0249900.1
– Monoterpene synthase; TAIR: AT4G16730.1 terpene synthase 02; Swiss-Prot: sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic; TrEMBL-Plants: tr|A0A072V9D0|A0A072V9D0_MEDTR Monoterpene synthase; Found in the gene: LotjaGi3g1v0249900
Domains
22
LotjaGi3g1v0334200.1
– Sesquiterpene synthase; TAIR: AT5G23960.2 terpene synthase 21; Swiss-Prot: sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase; TrEMBL-Plants: tr|Q5UBY0|Q5UBY0_MEDTR Sesquiterpene synthase; Found in the gene: LotjaGi3g1v0334200
Domains
23
LotjaGi3g1v0462800.1
– Terpene synthase; TAIR: AT3G25820.1 terpene synthase-like sequence-1,8-cineole; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|I1LRT2|I1LRT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462800
Domains
17
LotjaGi3g1v0462800.2
– Isoprene synthase; TAIR: AT3G25820.1 terpene synthase-like sequence-1,8-cineole; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|A0A151S688|A0A151S688_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0462800
Domains
13
LotjaGi3g1v0546500.1
– Terpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|B9RXW0|TPS7_RICCO Alpha-farnesene synthase; TrEMBL-Plants: tr|I1MS82|I1MS82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0546500
Domains
17
LotjaGi3g1v0546500.2
– Terpene synthase; TAIR: AT4G16740.1 terpene synthase 03; Swiss-Prot: sp|B9RXW0|TPS7_RICCO Alpha-farnesene synthase; TrEMBL-Plants: tr|A0A151TLR2|A0A151TLR2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0546500
Domains
10
LotjaGi4g1v0043400.1
– Terpene synthase; TAIR: AT2G24210.1 terpene synthase 10; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|K7KY89|K7KY89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043400
Domains
17
LotjaGi4g1v0046100.1
– Terpene synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|K7L2K8|K7L2K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0046100
Domains
17
LotjaGi5g1v0112300.1
– Linalool synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|K7L2K6|K7L2K6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0112300
Domains
17
LotjaGi5g1v0112300.2
– Linalool synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|K7L2K6|K7L2K6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0112300
Domains
17
LotjaGi6g1v0344200.1
– Nerol synthase; TAIR: AT1G61680.1 terpene synthase 14; Swiss-Prot: sp|P0CV94|NES1_FRAAN (3S,6E)-nerolidol synthase 1; TrEMBL-Plants: tr|G7IK35|G7IK35_MEDTR (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase; Found in the gene: LotjaGi6g1v0344200
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF48576 SUPERFAMILY 1 1.59