Domain Predictions — View

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PTHR31683:SF21

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4616550.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable pectate lyase 12-like [Cicer arietinum] gi\|502111521\|ref\|XP_004494082.1\|	Domains G3DSA:2.160.20.10 IPR002022 IPR011050 IPR012334 IPR018082 NON_CYTOPLASMIC_DOMAIN PF00544 PR00807 PTHR31683 PTHR31683:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00656 SSF51126 SignalP-noTM_EUK	17
Lj5g3v0670070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable pectate lyase 12-like [Glycine max] gi\|356546020\|ref\|XP_003541430.1\|	Domains G3DSA:2.160.20.10 IPR011050 IPR012334 IPR018082 NON_CYTOPLASMIC_DOMAIN PR00807 PTHR31683 PTHR31683:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51126 SignalP-noTM_EUK	14
Lj5g3v0670070.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable pectate lyase 12-like [Glycine max] gi\|356546020\|ref\|XP_003541430.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.160.20.10 IPR002022 IPR011050 IPR012334 IPR018082 NON_CYTOPLASMIC_DOMAIN PF00544 PR00807 PTHR31683 PTHR31683:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00656 SSF51126 SignalP-noTM_EUK TMhelix TRANSMEMBRANE	20
LotjaGi1g1v0686400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pectate lyase; TAIR: AT3G53190.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp\|Q9SCP2\|PLY12_ARATH Probable pectate lyase 12; TrEMBL-Plants: tr\|A0A072U2V5\|A0A072U2V5_MEDTR Pectate lyase; Found in the gene: LotjaGi1g1v0686400	Domains G3DSA:2.160.20.10 IPR002022 IPR011050 IPR012334 IPR018082 NON_CYTOPLASMIC_DOMAIN PF00544 PR00807 PTHR31683 PTHR31683:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00656 SSF51126 SignalP-noTM	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SignalP-noTM	SignalP_GRAM_NEGATIVE	1	25.00